Pairwise Alignments

Query, 807 a.a., PAS family GGDEF/EAL protein from Caulobacter crescentus NA1000

Subject, 721 a.a., diguanylate cyclase from Herbaspirillum seropedicae SmR1

 Score =  352 bits (902), Expect = e-101
 Identities = 201/457 (43%), Positives = 277/457 (60%), Gaps = 7/457 (1%)

Query: 322 WWALSAKPVHDLDGLFVGFRGVGADITQAREDQERISHLAHYDVLTQLPNRLSLLQNLGK 381
           W + +A+ V+D  G    + G    IT+ +  +  + H A +D LT LPNR  L ++L +
Sbjct: 247 WISENARAVYDEAGKLSCYEGTVEAITERKAHEAEMRHQATHDALTGLPNRNMLHEHLQR 306

Query: 382 AWMDHGRDKTSGCAVLCLDLDHFKGVNDSLGHPVGDALLMQVASRLRSCVGETGMVARLG 441
           A +   R K +  AV  +DLD FK +NDSLGH VGD LL  VA RL++C+ E  MVAR G
Sbjct: 307 A-LRVARQKGALTAVAFVDLDQFKFINDSLGHQVGDELLKTVAQRLQACLREADMVARQG 365

Query: 442 GDEFAVVCA-PSPGHEALSALSQSIVETLSAPYDILGHNVLIGASVGIAVAPFDADDPDG 500
           GDEF +V    + G   ++ + Q I+  ++ P+        + AS+G++  P D  D + 
Sbjct: 366 GDEFVLVLQNQTEGEAGIAEVMQRILAAVARPWQAGDREFQVTASIGVSRYPADGKDVES 425

Query: 501 LLKNADLALYRAKGDGRGAYRFFETAMDVWAQERRALEMDLREALARDELKLFFQPLIGR 560
           LLK+AD A+YRAK  GR  ++FF   MD     R  + ++LR AL +DE KL++QP +  
Sbjct: 426 LLKHADSAMYRAKEQGRNNFQFFAPWMDSQVSNRLEMLINLRRALDQDEFKLYYQPKLSL 485

Query: 561 RDNETTGFEALLRWQHPTRGLVPPSDFIECAEQWGLIGRIGEWVLNEACRTAATWPSH-- 618
           +D    G EAL+RW+ P +G+VPP  FI  AE+ GLI  IGEWVL  ACR    W     
Sbjct: 486 QDGRLIGAEALIRWESPQQGMVPPDRFIPFAEEAGLIVPIGEWVLRTACRQNQAWQQAGL 545

Query: 619 --LTVAVNLSPNQFASGDLVDQVRAALKASGLAPARLELEITEGLLLHDSAKTLEQLAAL 676
             + VAVNLSP Q  +  L D V   L  SGLA + LELEITE +++ D+ K++  L AL
Sbjct: 546 PPIPVAVNLSPRQL-NQSLPDFVAGVLAQSGLAASWLELEITENVVMKDAEKSVATLHAL 604

Query: 677 KALGVKIAMDDFGTGYSSLAYLWRFPFDKIKIDRSFVAEMQDNVAIADILRTIALLGQTL 736
           K LG++I++DDFGTGYSSL+YL RFP D +KID+SFV ++  +   A I++ I  L   L
Sbjct: 605 KRLGLQISVDDFGTGYSSLSYLRRFPVDALKIDKSFVRDIVRDADSAAIVKAIISLAHIL 664

Query: 737 NLEVTAEGVETQAQARLLAEMRCDQFQGFLFGRPMPV 773
           NL V AEGVE + Q   L E  CD+ QG+ FG+PM V
Sbjct: 665 NLRVIAEGVEDEEQHAFLKENACDEVQGYYFGKPMEV 701