Pairwise Alignments

Query, 229 a.a., LSU ribosomal protein L1P from Caulobacter crescentus NA1000

Subject, 233 a.a., 50S ribosomal protein L1 (RefSeq) from Shewanella amazonensis SB2B

 Score =  238 bits (606), Expect = 1e-67
 Identities = 125/231 (54%), Positives = 163/231 (70%), Gaps = 2/231 (0%)

Query: 1   MAKQPKRITAWTGDRDA--AHSVEAAIALVKANAKAKFDETIEISVNLGVDPRHADQQVR 58
           MAK  KR+       DA  A+ +  AI L+K  A AKF E+++++VNLGVDPR +DQ VR
Sbjct: 1   MAKLTKRMRVIREKVDATKAYDINEAITLLKELATAKFVESVDVAVNLGVDPRKSDQNVR 60

Query: 59  GVVNLPSGTGRDVRVAVFAKDAKAAEATAAGAEHVGADDLYEKIAGGFMDFDRVIATPDM 118
           G + LP GTGRDVRVAVF + A A  A  AGAE VG +DL E++  G M+FD VIA+PD 
Sbjct: 61  GAIVLPHGTGRDVRVAVFTQGANAEAAKEAGAELVGMEDLAEQVKAGEMNFDVVIASPDA 120

Query: 119 MALVGRLGKVLGPRGLMPNPKVGTVTPNVAQAVKDAKGGAVEFRVEKAGIVHAGIGKASF 178
           M +VG LG++LGPRGLMPNPK GTVTPNVA+AVK+AK G V +R +K GI+H  IGK  F
Sbjct: 121 MRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDF 180

Query: 179 TDEALAINVKALIEALNRSKPSGAKGVFIKRVGLSSTMGPGFKVDISSIGA 229
               L  N++AL+ AL + KP+ AKG ++K+V +S+TMG G  VD +++ A
Sbjct: 181 DSVKLKENLEALLVALKKQKPAAAKGQYVKKVSISTTMGAGVAVDQNTLEA 231