Pairwise Alignments

Query, 406 a.a., nitrate transporter (from data) from Caulobacter crescentus NA1000

Subject, 403 a.a., nitrite extrusion protein (nitrite facilitator) from Pseudomonas stutzeri RCH2

 Score =  499 bits (1286), Expect = e-146
 Identities = 247/403 (61%), Positives = 291/403 (72%)

Query: 2   LSREFLKAGHAPTLFAAFLYFDLSFMVWVILGPLGVAIAKDFNLDPAQKGLMVAVPVLAG 61
           +S  F KAGHAPTLFA+FLYFDLSFMVW +LGPLGV IA D  L   Q+  MVA P+LAG
Sbjct: 1   MSTSFWKAGHAPTLFASFLYFDLSFMVWYVLGPLGVQIAADLGLTTQQRAFMVATPILAG 60

Query: 62  AVLRLVNGVLVDRIGPKKTGIIGQLIVLAGLVTAWAVGLHNYQQILALGLVLGVAGASFA 121
           AVLRL  G+L DR  PK  G+ GQ +V+  L  AW  G+H+Y+Q L LGL LG+AGASFA
Sbjct: 61  AVLRLALGILADRTSPKTAGLFGQSVVIVALFVAWLHGIHSYEQALLLGLFLGMAGASFA 120

Query: 122 VALPLASRWYPQEHQGLALGIAGAGNSGTALAALFAPALAKTFGWQNVIGLAAIPLAFAF 181
           VALPLAS+WYP EHQG A+GIAGAGNSGT LAALFAP LA  FGW NV GLA IPL    
Sbjct: 121 VALPLASQWYPAEHQGKAMGIAGAGNSGTVLAALFAPVLAAIFGWNNVFGLALIPLVLTL 180

Query: 182 VAYLVLAKDAPEQPAPKKLAEYLDVLKVPDAWWLMLLYGVTFGGFVGLASSLTMYFNSEY 241
           + +  +AK+AP +PAPK LA+Y+  L   D+WW M  Y VTFGGF+GLAS+L  YF+ +Y
Sbjct: 181 IIFASVAKNAPNRPAPKSLADYMKALGDRDSWWFMFFYSVTFGGFLGLASTLPGYFHDQY 240

Query: 242 GLDPVIAGFFTAACVFAGSFIRPVGGALADRYGGVRTLGVVYVLAAIGLTVAGFQLPSAG 301
             DPV AG++TAACVFAGS +RP+GGALADR GG+R L V+Y +AA  +   GF LPS+ 
Sbjct: 241 AFDPVKAGYYTAACVFAGSLLRPLGGALADRIGGIRALLVMYTVAAFCIAAVGFNLPSST 300

Query: 302 LALAVLLFAMLALGAGNGAVFQLAPQRFRNEIGVMTGLIGMTGGIGGFYLASTLGLAKKM 361
            ALA+ + AML+LGAGNGAVFQL PQRF  EIGVMTGL+GM GGIGGF L + LG  K+ 
Sbjct: 301 AALALFVVAMLSLGAGNGAVFQLVPQRFNKEIGVMTGLVGMAGGIGGFLLTAGLGAVKQS 360

Query: 362 TGSYQSGFIGFALLAVFALIALFSLKARWRAVWPTLHGDAAPV 404
           TG YQ G   FA L V A   L  +K RWR  W +    AA V
Sbjct: 361 TGDYQIGLWLFASLGVLAWFGLHGVKRRWRTTWGSAAVTAARV 403