Pairwise Alignments
Query, 387 a.a., hypothetical protein with pentapeptide repeats from Caulobacter crescentus NA1000
Subject, 217 a.a., pentapeptide repeat family protein from Marinobacter adhaerens HP15
Score = 77.0 bits (188), Expect = 4e-19
Identities = 66/195 (33%), Positives = 86/195 (44%), Gaps = 26/195 (13%)
Query: 37 DLRGLDLSHRDLRGADLTGSDLSDARLEGVILEEAILFGALLERANLSLGRLQRADLRGA 96
DL+G DLS+ DLR A+ G++LS A L L A L GA L ++ RA +RGA
Sbjct: 46 DLQGADLSNMDLRSANFRGANLSGANLSHTSLRGANLDGANLNDVTGYRLQVYRASMRGA 105
Query: 97 NLRGAILDGADLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITGATLDGARMDQ 156
+LR A L G G+ A + A +GA L GA D
Sbjct: 106 SLRNARLQG--------MQGEYLFA------------------QGADFSGADLSGANFDF 139
Query: 157 VLMGEADLSECSLRGATMQGVRLKNARLRGADFSNANLAGADLRDADLTRAILVGTAIKG 216
A L ++ ++ + L A L GA+ S ANL A L A+L A L GT I
Sbjct: 140 SRFSGATLVNVNMPFSSFEISWLPKANLEGANMSGANLQEAKLGLANLADADLTGTRIHY 199
Query: 217 ARIEGAIIEGVLTAP 231
A EG +EG P
Sbjct: 200 ATFEGTHMEGCTACP 214
Score = 61.2 bits (147), Expect = 3e-14
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 24/200 (12%)
Query: 134 VSAARLE-SASITGATLDGARMDQVLMGEADLSECSLRGATMQGVRLKNARLRGADFSNA 192
++ +LE AS GA L GA + + DL + RGA + G L + LRGA+ A
Sbjct: 31 INGCKLEREASCAGADLQGADLSNM-----DLRSANFRGANLSGANLSHTSLRGANLDGA 85
Query: 193 NLAGADLRDADLTRAILVGTAIKGARIEGAIIEGVLTAPTPAAIEAAPTLRQALDSHRQW 252
NL + RA + G +++ AR++G ++G A A
Sbjct: 86 NLNDVTGYRLQVYRASMRGASLRNARLQG--MQGEYLFAQGADFSGAD------------ 131
Query: 253 FATGGASGQVARLEGRDLRPLGTLLANSELTALKARGACLAGMVLAGAMLQGADLDEADL 312
GA+ +R G L + ++ E++ L A L G ++GA LQ A L A+L
Sbjct: 132 --LSGANFDFSRFSGATLVNVNMPFSSFEISWLPK--ANLEGANMSGANLQEAKLGLANL 187
Query: 313 RGADLRGADLRGASLRGANL 332
ADL G + A+ G ++
Sbjct: 188 ADADLTGTRIHYATFEGTHM 207
Score = 59.3 bits (142), Expect = 1e-13
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 31/213 (14%)
Query: 152 ARMDQV--LMGEADLSECSLRGATMQGVRLKNARLRGADFSNANLAGADLRDADLTRAIL 209
A +DQV + G E S GA +QG L N LR A+F ANL+GA+L
Sbjct: 23 AELDQVPVINGCKLEREASCAGADLQGADLSNMDLRSANFRGANLSGANLSH-------- 74
Query: 210 VGTAIKGARIEGAIIEGVLTAPTPAAIEAAPTLRQALDSHRQWFATGGASGQVARLEGRD 269
T+++GA ++GA + V L +R + GAS + ARL+G
Sbjct: 75 --TSLRGANLDGANLNDVTG--------------YRLQVYRA--SMRGASLRNARLQGMQ 116
Query: 270 ---LRPLGTLLANSELTALKARGACLAGMVLAGAMLQGADLDEADLRGADLRGADLRGAS 326
L G + ++L+ + +G L + + + + L A+L GA++ GA+
Sbjct: 117 GEYLFAQGADFSGADLSGANFDFSRFSGATLVNVNMPFSSFEISWLPKANLEGANMSGAN 176
Query: 327 LRGANLSQADLREADLRNLGLETGRDLTTKLDG 359
L+ A L A+L +ADL + T ++G
Sbjct: 177 LQEAKLGLANLADADLTGTRIHYATFEGTHMEG 209
Score = 58.5 bits (140), Expect = 2e-13
Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 41/158 (25%)
Query: 89 QRADLRGANLRGAILDGADLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITGAT 148
+ A GA+L+GA L DLR +FR L S A L S+ GA
Sbjct: 38 REASCAGADLQGADLSNMDLRSANFRGANL----------------SGANLSHTSLRGAN 81
Query: 149 LDGARMDQVLMGEADLSECSLRGATMQGVRLKNARL----------RGADFSNANLAGAD 198
LDGA ++ V + S+RGA+ L+NARL +GADFS A+L+GA+
Sbjct: 82 LDGANLNDVTGYRLQVYRASMRGAS-----LRNARLQGMQGEYLFAQGADFSGADLSGAN 136
Query: 199 LRDADLTRAILVG----------TAIKGARIEGAIIEG 226
+ + A LV + + A +EGA + G
Sbjct: 137 FDFSRFSGATLVNVNMPFSSFEISWLPKANLEGANMSG 174
Score = 54.3 bits (129), Expect = 3e-12
Identities = 33/75 (44%), Positives = 40/75 (53%)
Query: 300 AMLQGADLDEADLRGADLRGADLRGASLRGANLSQADLREADLRNLGLETGRDLTTKLDG 359
A GADL ADL DLR A+ RGA+L GANLS LR A+L L ++
Sbjct: 40 ASCAGADLQGADLSNMDLRSANFRGANLSGANLSHTSLRGANLDGANLNDVTGYRLQVYR 99
Query: 360 AMLRYADLREAKRSG 374
A +R A LR A+ G
Sbjct: 100 ASMRGASLRNARLQG 114
Score = 50.8 bits (120), Expect = 3e-11
Identities = 56/195 (28%), Positives = 78/195 (40%), Gaps = 39/195 (20%)
Query: 192 ANLAGADLRDADLTRAILVGTAIKGARIEGAIIEGVLTAPTPAAIEAAPTLRQALDSHRQ 251
A+ AGADL+ ADL+ L +GA + GA + SH
Sbjct: 40 ASCAGADLQGADLSNMDLRSANFRGANLSGANL-----------------------SH-- 74
Query: 252 WFATGGASGQVARLEGRDLRPLGTLLANSELTALKARGACLAGMVLAGAMLQGADLDEAD 311
S + A L+G +L + L+ A + G L A LQG +
Sbjct: 75 ------TSLRGANLDGANLNDVTGY-------RLQVYRASMRGASLRNARLQGMQGEYLF 121
Query: 312 LRGADLRGADLRGASLRGANLSQADLREADLRNLGLETGRDLTTKLDGAMLRYADLREAK 371
+GAD GADL GA+ + S A L ++ E L+GA + A+L+EAK
Sbjct: 122 AQGADFSGADLSGANFDFSRFSGATLVNVNMPFSSFEISWLPKANLEGANMSGANLQEAK 181
Query: 372 RS-GNWPQADTTGAR 385
N AD TG R
Sbjct: 182 LGLANLADADLTGTR 196
Score = 38.1 bits (87), Expect = 2e-07
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 15 AAVAHARFRQGEGGRRLIMRFHDLRGLDLSHRDLRGADLTGSDLSDARLEGVILEEAILF 74
A++ +AR QG G L + D G DLS + + +G+ L + + E + L
Sbjct: 105 ASLRNARL-QGMQGEYLFAQGADFSGADLSGANFDFSRFSGATLVNVNMPFSSFEISWLP 163
Query: 75 GALLERANLSLGRLQRADLRGANLRGAILDGADLRQVDF 113
A LE AN+S LQ A L ANL A L G + F
Sbjct: 164 KANLEGANMSGANLQEAKLGLANLADADLTGTRIHYATF 202
Score = 37.4 bits (85), Expect = 4e-07
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 305 ADLDEAD-LRGADL-RGADLRGASLRGANLSQADLREADLRNLGLETGRDLTTKLDGAML 362
A+LD+ + G L R A GA L+GA+LS DLR A+ R L T L GA L
Sbjct: 23 AELDQVPVINGCKLEREASCAGADLQGADLSNMDLRSANFRGANLSGANLSHTSLRGANL 82
Query: 363 RYADLRE 369
A+L +
Sbjct: 83 DGANLND 89
Score = 31.2 bits (69), Expect = 3e-05
Identities = 18/47 (38%), Positives = 24/47 (51%)
Query: 328 RGANLSQADLREADLRNLGLETGRDLTTKLDGAMLRYADLREAKRSG 374
R A+ + ADL+ ADL N+ L + L GA L + LR A G
Sbjct: 38 REASCAGADLQGADLSNMDLRSANFRGANLSGANLSHTSLRGANLDG 84