Pairwise Alignments

Query, 387 a.a., hypothetical protein with pentapeptide repeats from Caulobacter crescentus NA1000

Subject, 242 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 57/186 (30%), Positives = 76/186 (40%), Gaps = 31/186 (16%)

Query: 37  DLRGLDLSHRDLRGADLTGSDLSDARLEGVILEEAILFGALLERANLSLGRLQRADLRGA 96
           D  G+DLS  DLRGA+           +   + E   FGA L        R + AD   A
Sbjct: 48  DFEGVDLSRLDLRGAE----------FQRCTIVETSFFGAALSHTRWVRCRGREADFASA 97

Query: 97  NLRGAILDGADLRQVDFRSGKLAVADEASQFVMIRRDVSAARLESASITGATLDGARMDQ 156
           +L  A    +DL    +R  KLA                     SAS     L GA  + 
Sbjct: 98  DLVDAAFQSSDLNNTSWRRAKLA---------------------SASFHSCKLTGANFEA 136

Query: 157 VLMGEADLSECSLRGATMQGVRLKNARLRGADFSNANLAGADLRDADLTRAILVGTAIKG 216
                    E  L GA ++G+  + A L+  DFS+A+LAG D R+A      L    +KG
Sbjct: 137 CTALGLSFVETLLVGAHLRGLSFRKATLQQLDFSDADLAGVDFREAIFDGGSLKDAHLKG 196

Query: 217 ARIEGA 222
           AR +GA
Sbjct: 197 ARFDGA 202



 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 54/192 (28%), Positives = 69/192 (35%), Gaps = 33/192 (17%)

Query: 188 DFSNANLAGADLRDADLTRAILVGTAIKGARIEGAIIEGVLTAPTPAAIEAAPTLRQALD 247
           DF   +L+  DLR A+  R  +V T+  GA +                            
Sbjct: 48  DFEGVDLSRLDLRGAEFQRCTIVETSFFGAAL---------------------------- 79

Query: 248 SHRQWFATGGASGQVARLEGRDLRPLGTLLANSELTALKARGACLAGMVLAGAMLQ---- 303
           SH +W    G     A  +  D     + L N+     K   A      L GA  +    
Sbjct: 80  SHTRWVRCRGREADFASADLVDAAFQSSDLNNTSWRRAKLASASFHSCKLTGANFEACTA 139

Query: 304 -GADLDEADLRGADLRGADLRGASLRGANLSQADLREADLRNLGLETGRDLTTKLDGAML 362
            G    E  L GA LRG   R A+L+  + S ADL   D R    + G      L GA  
Sbjct: 140 LGLSFVETLLVGAHLRGLSFRKATLQQLDFSDADLAGVDFREAIFDGGSLKDAHLKGARF 199

Query: 363 RYADLREAKRSG 374
             ADLREA  SG
Sbjct: 200 DGADLREADLSG 211



 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 62/217 (28%), Positives = 86/217 (39%), Gaps = 19/217 (8%)

Query: 138 RLESASITGATLDGARMDQVLMGEADLSECSLRGATMQGVRLKNARLRGADFSNANLAGA 197
           RL +AS+ G        D    G  DLS   LRGA  Q   +      GA  S+      
Sbjct: 29  RLVAASLAGNKAPLHFTDCDFEG-VDLSRLDLRGAEFQRCTIVETSFFGAALSHTRWVRC 87

Query: 198 DLRDADLTRAILVGTAIKGARIEGAIIEGVLTAPTPAAIEAAPTLRQALDSHRQWFATGG 257
             R+AD   A LV  A + + +         T+   A + +A      L          G
Sbjct: 88  RGREADFASADLVDAAFQSSDLNN-------TSWRRAKLASASFHSCKLT---------G 131

Query: 258 ASGQVARLEGRDLRPLGTLLANSELTALKARGACLAGMVLAGAMLQGADLDEADLRGADL 317
           A+ +     G  L  + TLL  + L  L  R A L  +  + A L G D  EA   G  L
Sbjct: 132 ANFEACTALG--LSFVETLLVGAHLRGLSFRKATLQQLDFSDADLAGVDFREAIFDGGSL 189

Query: 318 RGADLRGASLRGANLSQADLREADLRNLGLETGRDLT 354
           + A L+GA   GA+L +ADL    L +  L  G  ++
Sbjct: 190 KDAHLKGARFDGADLREADLSGVRLVDAALFKGATIS 226



 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 54/182 (29%), Positives = 71/182 (39%), Gaps = 28/182 (15%)

Query: 15  AAVAHARFRQGEGGRRLIMRFHDLRGLDLSHRDLRGADLTGSDLSDARLEGVILEEAILF 74
           AA++H R+ +  G      R  D    DL     + +DL  +    A+L         L 
Sbjct: 77  AALSHTRWVRCRG------READFASADLVDAAFQSSDLNNTSWRRAKLASASFHSCKLT 130

Query: 75  GALLERANLSLGRLQRADLRGANLRGAILDGADLRQVDFRSGKLAVADEASQFVMIRRDV 134
           GA  E             L GA+LRG     A L+Q+DF    LA  D            
Sbjct: 131 GANFEACTALGLSFVETLLVGAHLRGLSFRKATLQQLDFSDADLAGVD-----------F 179

Query: 135 SAARLESASITGATLDGARMDQVLMGEADLSECSLRGATMQGVRLKNARL-RGADFSNAN 193
             A  +  S+  A L GAR D   + EADL           GVRL +A L +GA  S+A 
Sbjct: 180 REAIFDGGSLKDAHLKGARFDGADLREADL----------SGVRLVDAALFKGATISHAQ 229

Query: 194 LA 195
            A
Sbjct: 230 AA 231