Pairwise Alignments

Query, 976 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 1032 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 94.7 bits (234), Expect = 3e-23
 Identities = 72/257 (28%), Positives = 124/257 (48%), Gaps = 24/257 (9%)

Query: 17  PSSLKQALLFTAAGLSLLATPAFA-------ASDADT-------PIATADSSTVSEVVVA 62
           P++       T+A  +  ATPA A       ASD  T       P ATA   T+  + V 
Sbjct: 80  PATATATATATSATATATATPATATAIGTGAASDTGTGKVASASPSATAGVQTLDAMQVT 139

Query: 63  GQRRSQARALQEQRDSLTVANVVSAEELQAQPTANLADLLSRLPGLSSAVDQSRNQAGTG 122
           G RR+ A A++ +R +  + +V+SA +++A P + + + L R+PGL S +  + N+    
Sbjct: 140 GVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGL-SVLPATDNEHPRD 198

Query: 123 EAQYVTIRGLDSAWNAYSMNGVRLAQ-------TDSKARTISMNLLSPFALSFVRVDKAP 175
           EA    +RGL  ++N  +++G+ +A          S  R + ++LL    +S ++V K  
Sbjct: 199 EAATPVLRGLGPSYNNVTIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVVKTF 258

Query: 176 TAEMDGDALAGTVDFRTATGFDFASN--YNRFRLQGQLADRAIQRDVDGLGYTTQLEMAR 233
           TA++D +A  G ++ +T + F+      ++     G   D    RD D  GY      +R
Sbjct: 259 TADLDPNATGGAINLKTRSAFENGGKPFFSAEAALGHANDVGKPRDQDDPGYRLNATGSR 318

Query: 234 TFGDAEQFAVYGNLYYQ 250
           TFG  +Q+    +  YQ
Sbjct: 319 TFGSEQQYGFTLSANYQ 335



 Score = 79.0 bits (193), Expect = 2e-18
 Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 29/288 (10%)

Query: 686  VLPSVIATWRPTDEIVVRGAVRRAYTRPAFDQMIGATSI-------SKDADGKIIAISIA 738
            +LPS I T+  T  + +R    R   RP +D     TSI       + +   + + ++I 
Sbjct: 734  LLPSAIMTYHLTGALELRVGASRTLGRPPYDAYAARTSIGFVNTTDAGNPSAQGVTVTIG 793

Query: 739  NPDLQPVTGINYDFSVEKY--GEDGQYLMASIYYKDLKNVMFVSGSTNTGSDFNVWTGDV 796
            NPD++P    N D S+E    G+   +   +++ K +++ +F    T++      +T D 
Sbjct: 794  NPDIKPRVSNNLDLSLEWRLPGDFDAFASTAVFDKRIQDEIFTLSRTDS------FTFDG 847

Query: 797  IKDAGGAEISRLDNAKNGSVLGIEL-GLRQRFTTLPGFWNGFGVSGNVTFQKTEADI--R 853
               A  A IS   NA    + G+E  G+      +  + +G G S N        D+   
Sbjct: 848  TTYAN-ALISTPANAAKARIRGVEFNGIVNTLAPIAPWLSGVGFSANFALLDGSLDVPYS 906

Query: 854  VGNLGKNLSRR------LINAPDSIVNASLFYNKHGVRAELAYSRVGMIYKDVRTDND-- 905
            VG+ G  +S+R      L+  PD   NA+LFYN  G+    AY+R G   + + ++ D  
Sbjct: 907  VGS-GSTVSQRERKLDNLVGQPDYTANATLFYNTGGLELRAAYNRQGKALRAIVSNIDWQ 965

Query: 906  DTWVQPMRRLNFNANYQLPHGWQIGMAVENILNDQSYWATQGKAETLL 953
            D +  P  +L+F A Y +     +   V N+ + +    T G  + LL
Sbjct: 966  DLYWSPRSQLDFTATYAVSKQLSLIGQVSNLTHSRISSVT-GPGQNLL 1012



 Score = 31.6 bits (70), Expect = 3e-04
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 628 AYVQSTLTFGDTLTVVPGVRYEDNNFKGSYWRPESVKGADGKTTSARV-----QASSDRG 682
           A+   T  F     V P      +N+  SYWRP+  + A  +  + R+     Q  SD+G
Sbjct: 526 AFNYDTSGFDQRFGVSPQAYNNLDNYSLSYWRPDYKRTAADRILTGRLDYGFNQGESDQG 585

Query: 683 MGIVLPSVIATWRPTDEI 700
           +G        T +P+ +I
Sbjct: 586 IGFAAGVSYTTDKPSYDI 603