Pairwise Alignments

Query, 976 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 853 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score =  166 bits (420), Expect = 6e-45
 Identities = 229/982 (23%), Positives = 392/982 (39%), Gaps = 160/982 (16%)

Query: 13  LNMQPSSLKQALLFTAAGLSLLATPAFAASDADTPIATADSSTVS--EVVVAGQRRSQAR 70
           LN  P  +   L   +   S LA    AA +A    A + ++ +    + V  Q  +Q R
Sbjct: 2   LNKTPLCMAITLTLASVAWSPLAQ---AAEEAVVTGAASGAAAIDLERLEVRPQLEAQER 58

Query: 71  ALQEQRDSLTVANVVSAEELQAQPTANLADLLSRLPGLSSAVDQSRNQAGTGEAQYVTIR 130
           A+  +R S  + + V+++ +   P  N+A+ L RLPG+S   DQ       GE ++V IR
Sbjct: 59  AVDLKRASDAIQDAVASDAMGRYPDKNVAESLQRLPGVSVTRDQ-------GEGRFVVIR 111

Query: 131 GLDSAWNAYSMNGVRLAQTDSKARTISMNLLSPFALSFVRVDKAPTAEMDGDALAGTVDF 190
           GLDS+ N+ +++G+ +   +   R+  ++++   +   ++V K+PT +M GD++ G +  
Sbjct: 112 GLDSSLNSVTIDGMSMGTPEDGTRSAPLDVIPSDSTERLKVVKSPTPDMPGDSIGGAIQV 171

Query: 191 RTATGFDFASNYNRFRLQGQLADRAIQRDVDGLGYTTQLEMARTFGDAEQ--FAVYGNLY 248
            + + FD           G+    +I+     L   T  + A  + D     F V   + 
Sbjct: 172 ESTSAFD---------RDGRTLRGSIEGSHQSLSGKTSPKGAFNYSDIYNGTFGVAVGVN 222

Query: 249 YQDKDNAGESRAVQQDYVKKDSTAPGLIRDQGA--NLYARGPQWNFYRNSVKRQGATLSL 306
           YQD++   ++  V  D             D GA  +L+A   Q   Y     R GA L+L
Sbjct: 223 YQDREFESDNTEVAYDSF-----------DGGAADDLFAGEVQRRKYFIERTRMGANLNL 271

Query: 307 DYKTDA------QSLYGRFTHGEFKLLTSMDQSSARLGLATAPSGSKELVDFLTSVRPSS 360
           D++ DA      +SLY RF   E +  T    +  +  ++    G+ ++ D         
Sbjct: 272 DWRPDADNRYYLRSLYSRFDDAETRQRTIFGLADGQ--VSANGDGTYDVADL-------- 321

Query: 361 AWQTAGDSDPKNISLYGAIPGQYSRTEHSTQTLTTALIGGETKRNAFTLDYAVSYSKGRT 420
                 DS  K +           R     +  T   +GGE + +A T+DY V Y+K   
Sbjct: 322 ----PADSISKRV-----------RYRTKKEDNTAISVGGENRLSAATVDYKVGYTKTTE 366

Query: 421 EYPFRMQAGFYAFPFIGTPDQGGKAVVPLITDISNPKDPRAVLTPEGLR---YISRTDIT 477
                M+A    F + G              D+S   D R+ +   G     + S  D  
Sbjct: 367 RVNDEMEA---RFNYDG-------------DDLSATVDQRSGIPRLGFSDNGWQSNQDFV 410

Query: 478 RQWYVTYGYEYAEESKTDLKANLAWDIEHPIVKSIKGGVKYETADRESNDVGTGDENRFY 537
              +V    +  ++S+   + N+ +D EH    S+K GV     +R   DV   ++    
Sbjct: 411 FDRFVV-SPKTVDDSEHSAQVNVRFDGEH---SSLKMGVLGRWRER---DVDVNEQELRR 463

Query: 538 FYKKDASGNWTANSALLGNGSHRWANQGEFLFDLPGKTLTSFMMGGLQVPMRLVDPDYLK 597
               D S +WT  +       HR    GE           S    G++         Y +
Sbjct: 464 GPAIDLS-SWTTAAP-----EHRGGTLGE-----------SIGSDGMR--------RYWR 498

Query: 598 NQAYKYAA---TIPWTNEVLKRNLLSGEETRASAYVQSTLTFGDTLTVVPGVRYEDNNFK 654
                Y+A    +    +V  ++  +  E   + Y   T   G  L ++ GVR E+  F 
Sbjct: 499 ASGGLYSARPQDVGGNQQVSLQDDYTATEDVFATYAMGTWDIG-ALRMIAGVRVENTQFN 557

Query: 655 GSYWRPESVKGADGKTTSARVQASSDRGMGIVLPSVIATWRPTDEIVVRGAVRRAYTRPA 714
               + +  +     T + R  +SS      VLP +   +   ++ V+R A  +  +RP+
Sbjct: 558 AIGNQVDVAENGRTATVTPREASSSYTN---VLPGLHLRYDSGNDWVLRFAANKTLSRPS 614

Query: 715 FDQMIGATSISKDADGKIIAISIANPDLQPVTGINYDFSVEKYGEDGQYLMASIYYKDLK 774
           F  +    SI++  +     +SI NPDL P    N D S EKY      +   ++ K + 
Sbjct: 615 FGDVSPRVSINRGDE----EVSIGNPDLNPYRSTNLDLSFEKYIGSTGLVSLGVFNKSID 670

Query: 775 NVMFVSGSTNTGSDFNVWTGDVIKDAGGAEISRLDNAKNGSVLGIELGLRQRFTTLPGFW 834
           + +  + ST T ++F            G +++R  N     V G E   +Q    LP  W
Sbjct: 671 DYIVQTLST-TDAEF-----------PGLQVTRSINGDTAKVRGAEFNWQQTLDFLPEGW 718

Query: 835 NGFGVSGNVTFQKTEADIRVGNLGKNLSRRLINAPDSIVNASLFYNKHGVRAELAYSRVG 894
           NG  V  + T   ++ D  + N   +    L  +   I +  L Y K+G  A     RV 
Sbjct: 719 NGLLVGASATALDSDFDPGLSNRAGD-DFMLPRSSKRIYSGHLGYEKYGFSA-----RVA 772

Query: 895 MIYKDVRTDN------DDTWVQPMRRLNFNANYQLPHGWQIGMAVENILNDQSYWATQGK 948
            +Y+    D        D +V P  +L+ + +YQ      + +  +N+L D+     QG 
Sbjct: 773 AVYRSEYLDTIGQSRAYDIYVAPHTQLDVSMSYQFNSHVSLYLEAQNLL-DEPLELYQGV 831

Query: 949 AETLLSHDRKGGYVETGRTYMI 970
               L ++      E GRTY +
Sbjct: 832 PSRTLQNE------EYGRTYAL 847