Pairwise Alignments

Query, 976 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 1066 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score = 90.9 bits (224), Expect = 4e-22
 Identities = 97/409 (23%), Positives = 156/409 (38%), Gaps = 69/409 (16%)

Query: 623  ETRASAYVQ---STLTFGDTLTVVPGVRYEDNNFKGSYWRP-------------ESVKGA 666
            E     Y+Q   +T  +G  L    GVRY       S + P             ES  G 
Sbjct: 672  EKSLGTYLQLDFNTDLWGRALRGNLGVRYVQTQIAASGYAPCTATASGAISPACESFFGV 731

Query: 667  DGKTTSAR----VQASSDRGMGIVLPSVIATWRPTDEIVVRGAVRRAYTRPAFDQMIGAT 722
               T +A     V  + +     +LPS+  +W  +DE+V+R    +   RP    +  + 
Sbjct: 732  ASATAAAGERLLVPTTVNHNYRDILPSLNLSWDVSDEVVLRFGAAKTMARPTLAYLSPSV 791

Query: 723  SISKDA---DGKIIAISIANPDLQPVTGINYDFSVEKYGEDGQYLMASIYYKDLKNVMFV 779
            S        DG+  +I++ NP L P    NYD S E Y  +G  L A+++YKD+ + +  
Sbjct: 792  SGGPTQFFDDGRFFSINLGNPKLDPFRSTNYDLSAEWYFREGSLLSAAVFYKDIDSYVQR 851

Query: 780  SGSTNT----GSDFNVWTGDVIKDAGGAEISRLDNAKNGSVLGIELGLRQRFTTLPGFWN 835
            +    T    G   ++       D     +    N   G + G EL  +Q F  LPGFW 
Sbjct: 852  TRVLTTWEAMGYSLDLLPAGFTPDT-IFNVQSYFNTPGGPLKGFELTYQQAFDFLPGFWR 910

Query: 836  GFGVSGNVTFQKTEADIRVGNLGKN--------LSRRLINAPDSIVNASLFYNKHGVRAE 887
             FG+  N T   ++ +      G +          R L+N      NA+++Y+     A 
Sbjct: 911  NFGIQLNYTQVDSKINYLFSTAGNSNTSITTTTTERDLLNLSPQSYNATVYYDDGRFSA- 969

Query: 888  LAYSRVGMIYKDVRTDN------------------DDTWVQPMRRLNFNANYQLPHGWQI 929
                RV   Y+D   +N                  D T    +  ++FN +Y++     +
Sbjct: 970  ----RVSTSYRDGYINNILAQEDVYNLDGQRLATADVTGKYSVENVDFNMSYKISDHLSL 1025

Query: 930  GMAVENILN--DQSYWATQGKAETLLSHDRKGGYVETGRTYMINTSWTF 976
                 N+L+  D+ Y       ++ L    K  Y  TGR Y +   + F
Sbjct: 1026 TFEAINLLDTPDRRY------VDSALELPDK--YTVTGRQYYVGARYKF 1066



 Score = 63.9 bits (154), Expect = 5e-14
 Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 16/187 (8%)

Query: 20  LKQALLFTAAGLSLLATPAFAASDADTPIATADSSTVSEVVV-AGQRRSQARALQEQRDS 78
           L  A L  A  L+L    A AA     P   AD+  +  V V A  R S  ++L  +R S
Sbjct: 16  LSAARLSVAIVLALHGVGA-AAQTVGPPATPADAVDLDRVQVKATYRESLQQSLDAKRYS 74

Query: 79  LTVANVVSAEELQAQPTANLADLLSRLPGLSSAVDQSRNQAGTGEAQYVTIRGLDSAWNA 138
           +   + + AE++   P  NLA+ + R+ G+S  +D+       GE + +++RGL S +  
Sbjct: 75  VEQVDAIYAEDIGKFPDLNLAESMQRIAGVS--IDREG-----GEGKQISVRGLGSDFTR 127

Query: 139 YSMNGVRLAQTD-------SKARTISMNLLSPFALSFVRVDKAPTAEMDGDALAGTVDFR 191
             +NG+    T        +++R    N  +    S V + K  +A+ D  +L  TVD R
Sbjct: 128 VRINGLEALATAGSGSDGVNRSRGFDFNTFASELFSRVTISKTQSAQTDEGSLGATVDLR 187

Query: 192 TATGFDF 198
            +  FDF
Sbjct: 188 GSRPFDF 194