Pairwise Alignments

Query, 976 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 913 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score = 84.7 bits (208), Expect = 3e-20
 Identities = 79/313 (25%), Positives = 132/313 (42%), Gaps = 33/313 (10%)

Query: 29  AGLSLLATPAFAASDADTPIATADSSTVSEVVVAGQRRSQARALQEQRDSLTVANVVSAE 88
           +G ++ A     A+    P A + ++ +  + V G R S  ++   +R + ++ + +SAE
Sbjct: 19  SGAAMAAGQEQQAAPQAAPNAPSSTTELDTITVTGYRASLEKSQAVKRSANSIVDAISAE 78

Query: 89  ELQAQPTANLADLLSRLPGLSSAVDQSRNQAGTGEAQYVTIRGLDSAWNAYSMNGVRLAQ 148
           ++   P  N A+ LS LPG+S  VD+       GE + V+I G D A N   +NG  +A 
Sbjct: 79  DIGKFPDINAAESLSHLPGIS--VDRQ-----FGEGEKVSINGTDPALNRVLLNGQTIAS 131

Query: 149 -------TDSKARTISMNLLSPFALSFVRVDKAPTAEMDGDALAGTVDFRTATGFDFASN 201
                  TD+  RT +  LLSP  +  + V K P A +D  ++ GTV   T    D   N
Sbjct: 132 GDWGGNPTDTSGRTFNYTLLSPEIIGLMEVYKTPEARIDEGSIGGTVIVHTRKPLDLPKN 191

Query: 202 YNRFRLQGQLADRAIQRDVDGLGYTTQLEMARTFG-------DAEQFAVYGNLYYQDKDN 254
             R  +     DR+ + +  G    +      TFG       D +  A  G  Y+     
Sbjct: 192 TIRGSIGYNYNDRSEEGNPRGSALWSWKNDDETFGALISATHDKQDLARAGIEYFGYTTG 251

Query: 255 AGESRAVQQDYVKKDSTAPGLIRDQGANLYARGPQWNFYRNSVKRQGATLSLDYKTDAQ- 313
           A          +   +T  G   D        G    F++ + +R G   +L +K + Q 
Sbjct: 252 AN---------IPASATITGDGSDVATARVPAGISSAFFQQTRERSGLQGALQWKPNEQN 302

Query: 314 --SLYGRFTHGEF 324
             +L G +  G++
Sbjct: 303 EFNLTGLYIKGKY 315



 Score = 73.9 bits (180), Expect = 4e-17
 Identities = 78/333 (23%), Positives = 128/333 (38%), Gaps = 39/333 (11%)

Query: 645 GVRYEDNNFKGSYWRPESVKGADGKTTSARVQASSDRGMGIVLPSVIATWRPTDEIVVRG 704
           GVR  D   K  +W+       DG     RV  ++D      LPS    +  TD+ V+R 
Sbjct: 619 GVRLVDTTNKSEFWQSN-----DGGANFDRVAETNDYRKA--LPSFNIAYDVTDDAVLRF 671

Query: 705 AVRRAYTRPAFDQMIGATSISKDADGKIIAISIANPDLQPVTGINYDFSVEKYGEDGQYL 764
           +  +   RP +  + G  +I+       +  +  NPDL+P    NYD + E Y      L
Sbjct: 672 SAAKVIARPRYADLAGTFTINSGTGD--LTANGGNPDLKPYESTNYDLAAEWYFAPSSML 729

Query: 765 MASIYYKDLKNVMFVSGSTNTGSDFNVWTGDVIKDAGGAEISRLDNAKNGSVLGIELGLR 824
              ++Y+D+ + +    ST T    N          G  +++   N  +  V G+ +  +
Sbjct: 730 SGEVFYRDISSYIV---STTTTQPLNPAPP---ARPGDYQVTTPVNVSDAKVTGVSVNYQ 783

Query: 825 QRFTTLPGFWNGFGVSGNVTFQKTEADIRVGNLGKNLSRRLINAPDSIVNASLFYNKHG- 883
           Q F        GFG+  N TF   E+D   G     LSR   N         + Y +HG 
Sbjct: 784 QTFGL------GFGLQANYTF--AESDSSSGLNLPYLSRDTYNV--------IPYWEHGD 827

Query: 884 VRAELAYSRVGMIYKDVRTDNDDTWVQPMRRLNFNANYQLPHGWQIGMAVENILNDQSYW 943
               + YS     +  +       +    ++L+ NA+YQ+     I     N+L D +Y 
Sbjct: 828 WTVRVNYSYRSKYFTQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNLL-DSTYR 886

Query: 944 ATQGKAETLLSHDRKGGYVETGRTYMINTSWTF 976
                     + D    + + GR Y    ++ F
Sbjct: 887 VFSN------TRDTPTAFYKNGRGYQAQLNFKF 913