Pairwise Alignments

Query, 976 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 938 a.a., TonB-dependent receptor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  138 bits (348), Expect = 2e-36
 Identities = 189/915 (20%), Positives = 362/915 (39%), Gaps = 158/915 (17%)

Query: 40  AASDADTPIATADSSTVSEVVVAGQRRSQARALQEQRDSLTVANVVSAEELQAQPTANLA 99
           A    +  +   +   + EVVV G  + Q RA+  Q+++L + NVVSA+++   P +N+ 
Sbjct: 99  AGKTLEKDVVLNEGLELQEVVVGGAFQGQRRAINSQKNNLGITNVVSADQVGKFPDSNIG 158

Query: 100 DLLSRLPGLSSAVDQSRNQAGTGEAQYVTIRGLDSAWNAYSMNGVRLAQTDSKARTISMN 159
           D L R+ G++   DQ       GEA++  +RG  +  ++ ++NG RL   +   R + ++
Sbjct: 159 DALKRINGINVQYDQ-------GEARFGQVRGTSADLSSVTINGNRLPSAEGDTRNVQLD 211

Query: 160 LLSPFALSFVRVDKAPTAEMDGDALAGTVDFRTATGFDFASNYNRFRLQGQLADRAIQRD 219
           L+    +  + V+K  T++MDGDA+ G+++  T      ++ Y R      +        
Sbjct: 212 LIPADMVQTIEVNKVVTSDMDGDAIGGSINLVTK-----STPYKR------MFSATAGTG 260

Query: 220 VDGLGYTTQLEMARTFGDA---EQFAVYGNLYYQDKDNAGESRAVQQDYVKKDSTAPGLI 276
            + +    QL +  T+GD    ++  +   + YQ+  +  +    + D  KK      ++
Sbjct: 261 YNWISQKAQLNLGFTYGDRFFNDKLGMMAAISYQNAPSGSDDVEFEYDVNKKGEVV--MV 318

Query: 277 RDQGANLYARGPQWNFYRNSVKRQGATLSLDY------KTDAQSLYGRFTHGEFKLLTSM 330
             Q    Y           + +RQ  +L+ DY      +   Q +Y R    E +     
Sbjct: 319 EAQKRQYYV----------TRERQSYSLAFDYDINPNHRLTLQGIYNRRHDWENRY---- 364

Query: 331 DQSSARLGLATAPSGSKELVDFLTSVRPSSAWQTAGDS-DPKNISLYGAIPGQYSRTEHS 389
                     T     K  +D    ++ S+  +T G + D +N  L              
Sbjct: 365 --------RVTYKDLDKTGLDDEGDMQQSAQIETKGGTPDNRNARL------------EL 404

Query: 390 TQTLTTALIGGETKRNAFTLDYAVSYSKGRTEYP----FRMQAGFYAFPFIGTPDQGGKA 445
            QT+  +L  GE +    ++++  SY++   + P    F ++  F  F  +   D+    
Sbjct: 405 QQTMDLSL-SGEHQFGKLSVNWGASYARASEDRPNERYFSLKQDFLGFTVVDAGDR---- 459

Query: 446 VVPLITDISNPKDPRAVLTPEGLRYISRTDITRQWYVTYGYEYAEE-SKTDLKANLAWDI 504
             P +T            T   L          +W V    E  +E  + DLK  +  D 
Sbjct: 460 -FPYVT------------TDVSLHNGEADGERGKWKVKELTESNQEIYEKDLKFKV--DF 504

Query: 505 EHPIVKSIKG-----GVKY--ETADRESNDVGTGDENRFYFYKKDASGNWTANSALLGNG 557
           E P+   I G     G KY  +T DR +      D  +  F K                 
Sbjct: 505 ELPLTNGIYGNSLRFGAKYASKTKDRNTLCYDYADTYKDTFDK----------------- 547

Query: 558 SHRWANQGEFLFDLPGKTLTSFMMGGLQVPMRLVDPDYLKNQAYKYAATIPWTNEVLKRN 617
                   +++ +L  +    +M G    P   V  +YL +             +VL+ +
Sbjct: 548 --------DYMNNLTSQIRDGYMPGDQYKPTDFVSKEYLGSLDLSSME----GEQVLEES 595

Query: 618 L--LSGEETRASAYVQSTLTFGDTLTVVPGVRYEDNNFKGSYWRPESVKGADGKTTSARV 675
                  E   SA+ +     G  + ++ G+R E  + K + W   +   AD K  +  +
Sbjct: 596 SGNYHARENVTSAFFRFDQNLGKKIKMMAGLRMEATHIKYNGW---NWNVADDKDETETL 652

Query: 676 QASSDRGMGIV--LPSVIATWRPTDEIVVRGAVRRAYTRPAFDQMIGATSISKDADGKII 733
           + + +     V  LPS++  +   D++ +R +     +RP +  +I   +I++ +D +++
Sbjct: 653 EPTGNHKNSYVNWLPSLLFKYDVNDDLKLRASFTETLSRPKYSALIPCVNINR-SDNELV 711

Query: 734 AISIANPDLQPVTGINYDFSVEKYGEDGQYLMASIYYKDLKNVM---FVSGSTNTGSDFN 790
              + N DL P    N D S + Y +    + A I+YK + + +    +   T   +++ 
Sbjct: 712 ---MGNSDLTPTISYNLDLSADYYFKSVGLISAGIFYKKINDFIVDQVIGDYTYQNNEYK 768

Query: 791 VWTGDVIKDAGGAEISRLDNAKNGSVLGIELGLRQRFTTLPGFWNGFGVSGNVTFQKTEA 850
            +T    K+AG A++           LG+EL  ++ F  +       G  G  T+  T+ 
Sbjct: 769 KFTQP--KNAGDADL-----------LGVELAYQRDFGFIAPALKCIGFYGTYTYTHTQV 815

Query: 851 ---DIRVGNLGKNLSRRLINAPDSIVNASLFYNKHGVRAELAYSRVGMIYKDV-RTDNDD 906
              +       K+LS  L  +P+   NASL++ K G     +Y+       ++      D
Sbjct: 816 NNFNFEGRENEKDLS--LPGSPEHTANASLYFEKKGFNVRFSYNYASSFIDEMGEVAALD 873

Query: 907 TWVQPMRRLNFNANY 921
            +   +  ++ NA+Y
Sbjct: 874 RYYDAVSYMDLNASY 888