Pairwise Alignments

Query, 976 a.a., TonB-dependent receptor from Caulobacter crescentus NA1000

Subject, 944 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (394), Expect = 7e-42
 Identities = 217/936 (23%), Positives = 380/936 (40%), Gaps = 139/936 (14%)

Query: 53  SSTVSEVVVAGQRRSQARALQEQRDSLTVANVVSAEELQAQPTANLADLLSRLPGLSSAV 112
           S  V  + V GQ+ + ++++  QR +  V +VVSA+ L   P +N+++ L R+PGLS   
Sbjct: 133 SQDVEHIRVVGQQGALSKSMNRQRGADNVLSVVSADVLGNFPDSNISESLQRVPGLSIER 192

Query: 113 DQSRNQAGTGEAQYVTIRGLDSAWNAYSMNGVRLAQTDSKARTISMNLLSPFALSFVRVD 172
           DQ       GE ++V +RG+   +N+ SMNG RL   +S  R ++++++    L  V V 
Sbjct: 193 DQ-------GEGRFVRVRGMAPDYNSVSMNGTRLPSPESDRRAVALDVVPSDLLQSVEVS 245

Query: 173 KAPTAEMDGDALAGTVDFRTATGFDFASNYNRFRLQGQLADRAIQRDVDGLGYTTQLEMA 232
           K  T +MD DAL G ++ ++ + FD    Y     +            D L   T  ++A
Sbjct: 246 KTLTPDMDADALGGAIEVKSLSAFDRDDTYLNLNAEA---------SQDTLTDNTNPKLA 296

Query: 233 RTFGD--AEQFAVYGNLYYQDKDNAGESRAVQQDYVKKDSTAPGLIRDQGANLYARGPQW 290
            ++ D  A++  V     + ++D   ++  V+     + +   GL      ++ AR    
Sbjct: 297 ASYSDIFADKLGVAIGASWYNRDFGSDN--VETGGKWEFAGDNGLEDAALESIDARD--- 351

Query: 291 NFYRNSVKRQGATLSLDYK-TDAQSLYGRFTHGEFKLLTSMDQSSARLGLATAPSGSKEL 349
             Y  + +R G  ++ DY+ +D   LY R  + EF      D +  R    T        
Sbjct: 352 --YEINRERLGIGVNFDYRPSDDTDLYLRTLYSEF------DDTETRNSAKT-------- 395

Query: 350 VDFLTSVRPSSAWQTAGDSDPKNISLYGAIPGQYSRTEHSTQTLTTALIGGETKRNAFTL 409
                       W++   ++   +S         SRTE+  Q +T+ ++GG+T+   +T 
Sbjct: 396 -----------KWKSPQQANA--LSQGKTTRSLKSRTEN--QNITSFVLGGQTRFERWTF 440

Query: 410 DYAVSYSKGRTEYPFRMQAGFYAFPFIGTPDQGGKAVVPLITDISNPKDPRAVLTPEGLR 469
           DY  S+S    E P R  AG     F+   D          T  SN K P+ ++ PE   
Sbjct: 441 DYQASHSTASAEKP-RDIAG---ADFVAKIDN---------TGFSNTKQPQ-IIAPEDYF 486

Query: 470 YISRTDITR-QWYVTYGYEYAEESKTDLKANLA---WDIEHPIVKSIKGGVKYETADRES 525
             +  ++   +   +   +     + DL   L    + +E      +K GVK    D+ +
Sbjct: 487 QNANFELDEIEIAASKAEDTINSGQLDLTRQLTLADYSVE------LKTGVKLSRRDKSN 540

Query: 526 NDVGTGDENRFYFYKKDASGNWTANSALLGNGSHRWANQGEFLFDLPGKTLTSFMMGGLQ 585
            +         + Y        + +  LL   S    N+ ++        L  F  G   
Sbjct: 541 RE-------DIWIYSDLGDQGVSDDDLLL---SQYAGNELDY-------DLGRFGSGINA 583

Query: 586 VPM-RLVDPDYLKNQAYKYAATIPWTNEVLKRNLLSGEETRASAYVQSTLTFGDTLTVVP 644
            P+ +L+D     +      +TI         N     E   +AY+   +   D L ++ 
Sbjct: 584 APLWQLIDSLDADSNRDDIESTI---------NDFDISEDINAAYLMGHIDI-DKLRILT 633

Query: 645 GVRYEDNNFKGSYWRPESVKGADGKTTSARVQASSDRGMGIVLPSVIATWRPTDEIVVRG 704
           G+R+E N +  S +      GA G+    +     D      LP++  T+R +D  V+R 
Sbjct: 634 GLRFEQNQWDSSGY---GYDGAKGEFIDIKHSRDEDHW----LPALHLTYRYSDNTVLRA 686

Query: 705 AVRRAYTRPAFDQMIGATSISKDADGKIIAISIANPDLQPVTGINYDFSVEKYGEDGQYL 764
           A      RP F Q+     + +D DG  I ++  NP L+ +  +N+D S+E Y  +   +
Sbjct: 687 AWTNTLVRPTFGQLAPGYLLEED-DGD-IDLTFGNPQLKSLESMNFDLSLEHYFGNIGLI 744

Query: 765 MASIYYKDLKNVMFVSGSTNTGSDFNVWTGDVIKDAGGAEISRLDNAKNGSVLGIELGLR 824
            A ++YKD+ N ++ +     G            DA  A      N  +  + G+EL   
Sbjct: 745 SAGLFYKDIDNFIYQADLAGRGD---------YVDAHSA--VTFVNGDSADIYGVELSYV 793

Query: 825 QRFTTLPGFWNGFGVSGNVTFQKTEADIRVGNLGKNLSR--RLINAPDSIVNASLFYNKH 882
           Q F  LP  +N   ++ N+T+  + A I     G+ LSR   + +  D   N SL Y   
Sbjct: 794 QEFNFLPEPFNALVLNSNLTYTDSSAKISWLEDGQLLSRDIPMPSQSDLTANLSLGYENS 853

Query: 883 GVRAELAYSRVGMIYKDVRTDND---DTWVQPMRRLNFNANYQLPHGWQIGMAVENILND 939
                L+ +      ++V   +D   D +     + +F A   L     +     N L D
Sbjct: 854 YASVWLSAAYKSEYLQEVTELSDERYDLYQDNHLQWDFVAKAHLTSNLTLYFKGVN-LTD 912

Query: 940 QSYWATQGKAETLLSHDRKGGYVETGRTYMINTSWT 975
           + Y++  G +           Y   GRT+ +   +T
Sbjct: 913 EPYYSYTGDSA------YNAQYEAYGRTFQLGVQYT 942