Pairwise Alignments

Query, 299 a.a., hydroxymethylglutaryl-CoA lyase from Caulobacter crescentus NA1000

Subject, 310 a.a., hydroxymethylglutaryl-CoA lyase (RefSeq) from Shewanella sp. ANA-3

 Score =  195 bits (495), Expect = 1e-54
 Identities = 110/292 (37%), Positives = 162/292 (55%), Gaps = 6/292 (2%)

Query: 5   IQIVEVGPRDGLQNEKTVLSVEEKLDLIAKLEAAGARRTEVVSFVNPSRVPQMAGAEEIM 64
           + + E+GPRDGLQNE  V   + K+ LI  L  AG +R E  SFV+P  VPQMA + +++
Sbjct: 16  VSLFEMGPRDGLQNEAAV-PTQAKVALIESLADAGVKRIEAGSFVSPKWVPQMADSGDVL 74

Query: 65  AAL--PADLVHSRIGLVLNMRGWERCVSTGCDEANVVVCASDGFATRNQGSTTQQQVETL 122
             +   A +V+S   L  N++G E  +     E  +   AS  F+ RN   + ++ +E  
Sbjct: 75  RQIRRQAGVVYS--ALTPNVKGLELALDAKASEVAIFGAASQSFSQRNINCSIEESIERF 132

Query: 123 AAIVERQAAEGGPPITATISVAFGCPFDGEVSQDQVVAIVREAAALGVPEIAIADTIGVA 182
             +++  A     P+   +S   GCP++GE++  +V  +      +G  EI++ DTIGV 
Sbjct: 133 IPLMD-MAKAANIPVRGYVSCVLGCPYEGEIAASEVARVSEILYKMGCYEISLGDTIGVG 191

Query: 183 DPWTVRRRIEAVRAAAPDTRLRMHFHDTRNTGLANAFASVEAGVDVLDASVGGLGGCPFA 242
            P   R+ ++AV    P   L +HFHDT    LAN  A ++ GV   DASV GLGGCP+A
Sbjct: 192 TPLKARKMLQAVMERVPVEMLALHFHDTYGQALANITACLDLGVRSFDASVAGLGGCPYA 251

Query: 243 PNATGNIGTEDLVYMLERAGFETGYDLAALIQIGRDISQRLGKAPASSLARA 294
             A+GN+ +EDLVYML   G +TG DL  L   G  IS++L +   S +A A
Sbjct: 252 KGASGNLASEDLVYMLHGLGLKTGIDLEKLALAGFGISKQLNRLNGSKVANA 303