Pairwise Alignments

Query, 889 a.a., N-acetyl-glucosamine/N-acetyl-chitin oligosaccharide outer membrane transporter nagA from Caulobacter crescentus NA1000

Subject, 913 a.a., N-acetylglucosamine-regulated TonB-dependent outer membrane receptor from Xanthomonas campestris pv. campestris strain 8004

 Score =  562 bits (1448), Expect = e-164
 Identities = 355/929 (38%), Positives = 510/929 (54%), Gaps = 82/929 (8%)

Query: 7   SVLAASASAMVVMIAAPAMAQSGGNEVEQVVITGIRASLLQSIESKRKADAIVDVVTAED 66
           + +AA         AAP  A S   E++ + +TG RASL +S   KR A++IVD ++AED
Sbjct: 21  AAMAAGQEQQAAPQAAPN-APSSTTELDTITVTGYRASLEKSQAVKRSANSIVDAISAED 79

Query: 67  VGKFPSTNVAEALTIVPGVTVDRAFGQGEKVSILGTDPALNRTLLNGQTVASADWF--IL 124
           +GKFP  N AE+L+ +PG++VDR FG+GEKVSI GTDPALNR LLNGQT+AS DW     
Sbjct: 80  IGKFPDINAAESLSHLPGISVDRQFGEGEKVSINGTDPALNRVLLNGQTIASGDWGGNPT 139

Query: 125 DSPGRTFNYALLAPQIVGKVDVYKSPEARIDEGSIGGTVIVNTRKPLDLKSGTIAGAVSY 184
           D+ GRTFNY LL+P+I+G ++VYK+PEARIDEGSIGGTVIV+TRKPLDL   TI G++ Y
Sbjct: 140 DTSGRTFNYTLLSPEIIGLMEVYKTPEARIDEGSIGGTVIVHTRKPLDLPKNTIRGSIGY 199

Query: 185 LYTDRSKKGDLQGSLLASWKNADSTFGASFSIQRAEDQLRRDGVETYG-TIAANQWAGGN 243
            Y DRS++G+ +GS L SWKN D TFGA  S    +  L R G+E +G T  AN  A   
Sbjct: 200 NYNDRSEEGNPRGSALWSWKNDDETFGALISATHDKQDLARAGIEYFGYTTGANIPA--- 256

Query: 244 PDNPVDSRTKGCVGSCASTLTANLGARSPNAFGASYFEQGRTRTTYTTALQYKPNDQLSL 303
                 S T    GS  +T      AR P    +++F+Q R R+    ALQ+KPN+Q   
Sbjct: 257 ------SATITGDGSDVAT------ARVPAGISSAFFQQTRERSGLQGALQWKPNEQNEF 304

Query: 304 EFNWLKIDADYDNTNQSMYAF--------------QGNTW--NSLGALTGLTVNNGVVSK 347
               L I   Y+N +Q+ Y                 GN    N++  +   TV +GVV+ 
Sbjct: 305 NLTGLYIKGKYNNFSQARYVCPNCSSPAADGSLDANGNQVQINNMRLIDRATVQDGVVTS 364

Query: 348 ASF-NNAL----SVLDVQHREAGLKSDTFHLKGGYKGDGWDLNGEVGKSTADGGTKRQVF 402
           A+F +N L    S LD  +RE+ + + + +L+  + G+ W    + G + A GG   +  
Sbjct: 365 ANFADNGLAQPYSQLDTIYRESTVTTKSLNLRHDWSGEKWVFTTQGGYTEATGGKNPEYL 424

Query: 403 LEFL------NWA------SYTVDISGA-----PKSPGSLTYTTNVLGNPSAFATDPGWS 445
           +++L      N+A      +   +  GA     P +P  L      +GN     T    +
Sbjct: 425 MKYLMQDGGYNYAFDGRNTAVNYENGGAANWVLPGNPAGLA--PGQVGNVPGTGTPIMQA 482

Query: 446 GNLVSKPTSDEEKYAQFDFGKDFD-GVIQRVQVGYKRREHQTGQQYAGIAITGV-AAPAS 503
           G +  + + D+EKY Q+D  +D + G   ++Q GYK   H  G +  G  I    A   +
Sbjct: 483 GGIAYQKSKDDEKYFQWDASRDLEWGPFTKLQFGYKYINHNNGVEARGNRINSTDAVSLT 542

Query: 504 SFNPSTVPSNYLKGFDGVGTQMQNRFRIDGNAMVSYVESGKWLAAGATMPKPSIFAAAEF 563
            FNP   PS+   G  G    + N      +++ +Y+ S           +P      +F
Sbjct: 543 QFNPGRTPSSLYDGL-GASGDLTNWSTASLDSVRNYLLS-----------QPQGPYLTDF 590

Query: 564 TAGNWNIQEDIDALYAQANFKADNVRGNFGVRYVKTSVDSAGYVCKPGAACNKAADWSWK 623
            A ++ ++E    +Y Q NF++   RGN GVR V T+  S  +    G A     ++   
Sbjct: 591 GA-SFQVKEITQNVYTQLNFESGQWRGNVGVRLVDTTNKSEFWQSNDGGA-----NFDRV 644

Query: 624 STKKSYDNVLPSVNIIVDAREDLVLRFAAAQVIARPNYSDMTNYFWLSDGI--LTGGGGN 681
           +    Y   LPS NI  D  +D VLRF+AA+VIARP Y+D+   F ++ G   LT  GGN
Sbjct: 645 AETNDYRKALPSFNIAYDVTDDAVLRFSAAKVIARPRYADLAGTFTINSGTGDLTANGGN 704

Query: 682 PALEPYKSSNFNASAEWYFQPQAILSAEVFYKDISNYILQRTQPESYFNQSQGKVTTYQI 741
           P L+PY+S+N++ +AEWYF P ++LS EVFY+DIS+YI+  T  +        +   YQ+
Sbjct: 705 PDLKPYESTNYDLAAEWYFAPSSMLSGEVFYRDISSYIVSTTTTQPLNPAPPARPGDYQV 764

Query: 742 SRPFNAGSAEVKGLAMAYQQTFGGGFGLLANYTYADASGQSGAPLPYSSKNQVNLSPFYE 801
           + P N   A+V G+++ YQQTFG GFGL ANYT+A++   SG  LPY S++  N+ P++E
Sbjct: 765 TTPVNVSDAKVTGVSVNYQQTFGLGFGLQANYTFAESDSSSGLNLPYLSRDTYNVIPYWE 824

Query: 802 NGPFSARATFTWRSKYFTGVDRGDDM-FVKAAKTLDATVGYAVTKNITMSLSGQNLLDSE 860
           +G ++ R  +++RSKYFT + R     F  A K LD    Y +T  + ++    NLLDS 
Sbjct: 825 HGDWTVRVNYSYRSKYFTQIGRLQSRDFADAYKQLDLNASYQITDYMGITFGATNLLDST 884

Query: 861 YYAYANTTALPRGVYRTGRKLQATLNVAF 889
           Y  ++NT   P   Y+ GR  QA LN  F
Sbjct: 885 YRVFSNTRDTPTAFYKNGRGYQAQLNFKF 913