Pairwise Alignments

Query, 889 a.a., N-acetyl-glucosamine/N-acetyl-chitin oligosaccharide outer membrane transporter nagA from Caulobacter crescentus NA1000

Subject, 925 a.a., TonB-dependent receptor from Lysobacter sp. OAE881

 Score =  181 bits (460), Expect = 1e-49
 Identities = 226/985 (22%), Positives = 376/985 (38%), Gaps = 161/985 (16%)

Query: 4   IRKSVLAASASAMVVMIAAPAMAQSGGNE-------------VEQVVITGIRASLLQSIE 50
           +++++L+ + ++  +++AA A AQ                  ++ VV+TGIRA +  SI+
Sbjct: 3   LKRNLLSVALASATMLVAAGAQAQVATQSPQGEPSRTDETKTLDSVVVTGIRAGIETSID 62

Query: 51  SKRKADAIVDVVTAEDVGKFPSTNVAEALTIVPGVTVDRAFGQGEKVSILGTDPALNRTL 110
           +K+++ +IV+ V+AED+GK P  ++AE++  +PG++  R  G+ + +S+ G  P    TL
Sbjct: 63  TKKESTSIVEAVSAEDIGKLPDVSIAESIARLPGLSAQRVGGRAQVISVRGLSPDFATTL 122

Query: 111 LNGQTVASADWFILDSPGRTFNYALLAPQIVGKVDVYKSPEARIDEGSIGGTVIVNTRKP 170
           LNG+ + S          R+  +     +++  V VYK+P+A +    + GT+ + T +P
Sbjct: 123 LNGREMVST------GDNRSVEFDQYPAELMSGVTVYKTPDAGLVGQGLSGTIDMRTVRP 176

Query: 171 LDLKSGTIAGAVSYLYTDRSKKGDLQGS------LLASW--KNADSTFGASFSIQRAEDQ 222
           LD     IA +  Y    R+  GD   +      + AS+  +  D T G S      E  
Sbjct: 177 LDYDKPVIAVSGRY---QRNSLGDAANADGDGNRINASYIGQFMDRTLGFSIGYSHTELP 233

Query: 223 LRRDGVETYGTIAANQWAGGNP-DNPVDSRTKGCVGSCASTLTANLGARSPNAFGASYFE 281
           ++ + V  Y   +A     G+   N V   T    G  A   T  +              
Sbjct: 234 IQENQVGLYEPWSATTGPDGDRFRNGVPEGTFFADGIKALRRTGEI-------------- 279

Query: 282 QGRTRTTYTTALQYKPNDQLSLEFNWLKIDADYDNT-NQSMYAFQGNTWNSLGALTGLTV 340
               R      +QY+P++  +   +     AD ++T NQ      G           + V
Sbjct: 280 ---ERDAVMATVQYRPSNDWTSTLDLFHTKADQEDTANQFEVNLSGYNGGGENDPRVVIV 336

Query: 341 NNGVVSKASFN-----NALSVLDVQHREAGLKSDTFHLKGGYKGDGW--DLNGEVGKSTA 393
           N  V    SF      N   ++   +R+   K D F         GW  D N  + +  A
Sbjct: 337 NPQVNENGSFTGGTAVNVYPLVRGMYRKREDKIDAF---------GWANDFNVGLARVKA 387

Query: 394 DGGTKRQVFLEFLNWASYTVDISGAPKSPGSLTYTTNVL---------GNP-SAFATDPG 443
           D G  R    E L   + T  +        +L Y +N            NP + F T+  
Sbjct: 388 DIGWSRAEREELL-LENNTQQVPRLQLDNLNLAYNSNGFSWLVPGRDYSNPETLFLTNTI 446

Query: 444 WSGNLVSKPTSDEE-----KYAQFDFGKDFDGVIQRVQVG--YKRREHQTGQQYAGIAIT 496
           +       P  ++E       A     +   G +  + VG  Y  RE Q  Q    I + 
Sbjct: 447 YGSGYGKVPRVEDELKTYTLAAALPAPQFASGFLSDIDVGINYADREKQKTQPEGNINLG 506

Query: 497 GVAAPASSFNPSTVPSNYLKGFDGVGTQMQNRFRIDGNAMVSYVESGKWLAAGAT---MP 553
                              +G   +   +Q      G A + Y+ +  W   GA    M 
Sbjct: 507 A------------------QGDTAIARDLQYGLVNLGFAGMGYIPA--WNVPGAVDRYMT 546

Query: 554 KPSIFAAAEFTAGNWNIQEDIDALYAQANFKAD----NVRGNFGVRYVKTSVDSAG---- 605
              +   +      W + E +   Y + N   +     VRGN GV+   T   S      
Sbjct: 547 FNPVDNLSYLIPKAWTVDEKLTTGYVKGNIDTEWGSVGVRGNIGVQIQHTDQSSRANFWD 606

Query: 606 YVCKPGAACNKAADWSWKSTKKSYDNVLPSVNIIVDAREDLVLRFAAAQVIARPNYSDMT 665
               PG+              K+Y + LPS+N+      D  LR A A+ +ARP    + 
Sbjct: 607 STQPPGSEVQP------YENGKTYTDYLPSMNLAFLFPHDQTLRMALARQVARPRVDQLR 660

Query: 666 NYFWLSDGILTG----GGGNPALEPYKSSNFNASAEWYFQPQAILSAEVFYKDISNYILQ 721
                     TG     GGNP L+P++++ F+ S E YF  +A ++A  FYKD+ +YI  
Sbjct: 661 ASLEFGVDTSTGRPGASGGNPELDPWRANAFDISYEKYFGTKAYVAAAYFYKDLRSYIYT 720

Query: 722 RTQPESYFN----------QSQGKVTTYQISRPFNAGSAEVKGLAMAYQQTFG------G 765
           +T     F+                T    + P+N    +++G+ ++             
Sbjct: 721 QTNDNYDFSAFVADYVPGPNEPPTQTIGNFTAPYNGKGGKLQGIELSASLPLDMLWAPLE 780

Query: 766 GFGLLANYTYADAS------------GQSGAPLPYSSKNQVNLSPFYENGPFSARATFTW 813
           GFG++A+ ++ D+             G     LP  S    N + +YE   F AR +   
Sbjct: 781 GFGIVASASFNDSDIEILDPESASSVGSDPISLPGLSDEVYNFTAYYERAGFEARVSQRK 840

Query: 814 RSKYFTGVDRGDD----MFVKAAKTLDATVGYAVTK-----NITMSLSGQNLLDSEYYAY 864
           RS +   +   D      +V     LDA + Y+  +      +T+     NL +S Y  Y
Sbjct: 841 RSDFIGEIGNFDGNRTLRYVVGEDQLDAQISYSFGEASSLAGLTLLFEASNLTNSPYQTY 900

Query: 865 ANTTALPRGVYRTGRKLQATLNVAF 889
           A T   P      GR      N  F
Sbjct: 901 AGTKDRPLEYIEWGRTYLIGANYKF 925