Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Caulobacter crescentus NA1000

Subject, 689 a.a., methyl accepting chemotaxis transmembrane protein from Sinorhizobium meliloti 1021

 Score =  321 bits (823), Expect = 6e-92
 Identities = 233/652 (35%), Positives = 353/652 (54%), Gaps = 51/652 (7%)

Query: 43  AVMAGGAILVQKSQSAALKQVVERDMRQNLEIQRISKRISNINGELFVVMTHKAGNIDVD 102
           +V+A G      SQ A  K V+ +     LE  R++ R+  +   +  ++      I  +
Sbjct: 30  SVLAVGLYEQGGSQEALDKAVIAQRGMGTLEEMRLA-RLELVLAAMDTIVDRGERRIQPE 88

Query: 103 KNDARMAAVLVETDAVKKDLLAL-----KSKLPAEEQPKIAELIKSLEECRSAIDTVSGM 157
           +  A++ + L   +  + DL AL     K ++ A  +  +A+L K++E+   A+      
Sbjct: 89  RA-AQIGSSLEVIEGRQADLEALARLIGKPEVLAGFESDMAQLRKAVEQDLKAL------ 141

Query: 158 ISVDFNMAAGFIAPFEEQYVKMTGQLDQVVAAANQRIESESAKRQAQATAAMSVTIIMSL 217
                 + AG  AP EE       ++D V+ AA +R+ +  A+  A A A+++   I  +
Sbjct: 142 ------VEAG--APAEE-----FARIDDVIDAAGERVGASLAQL-ADAAASLAAGRIADV 187

Query: 218 LTLGA----VGALAFLTVMTT------------RKSINDIAAATDKLSKGDNSIDLEKMT 261
            T G     + A A L  M T            R+ I  +  +  ++  GD + +   + 
Sbjct: 188 RTSGEHALMLQAAACLLAMATLIGLIWFHGNVLRRGILGLRDSMRRIHSGDLTAEAAGLD 247

Query: 262 RGDELGGIVTALKVFRDNQVHLEQLRADQEKSAALTADERRSKEAAAAAAAQEASLVVSN 321
           RGDE+G +  ++++FR + +    L+     S   T  ER   E     A    +  V  
Sbjct: 248 RGDEIGEMARSVELFRVSAIEKRALKERARASRQETETERERHETEREQAIGLINTAVEA 307

Query: 322 LAEGLEKLASGDLTFRVTADFPGDYRKLKDDFNAAMGSLQETMKVIAASTDGLSTGADEI 381
           L   L +LA G+L   +   F G    L+ DFN  +  L + +  +  +T  + +   ++
Sbjct: 308 LGGALNQLADGNLAVAIREPFDGGLDALRRDFNDTVERLSQVLSSVKENTASIESNGRQM 367

Query: 382 AHASDDLSRRTEQQAASLEETAAALDELTATVRRTAAGARQASDVVSTTRGEATHSGQVV 441
             A+DDL+RRTE+QAASLE+T+AAL+E+T TV+     A +AS +V  TR  A  SG++V
Sbjct: 368 RSAADDLARRTEKQAASLEQTSAALEEITVTVKTATERAEEASHMVDETRINAEESGRIV 427

Query: 442 HQAVSAMGEIEKSSGQISQIIGVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVAQEVR 501
            +A++AM  IE +S +I +II VIDEIAFQTNLLALNAGVEAARAGEAG+GFAVVAQEVR
Sbjct: 428 GEAIAAMARIEGASSEIGKIIDVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVR 487

Query: 502 ALAQRSAEAAKEIKALISSSTQQVSQGVSLVGQTGEALQRIVTKVGEIDALVTEIAASAA 561
            LAQR+A AAK+IKAL+S S  +V  GV LV +TG+AL RI  KV  I+  ++ I  +A 
Sbjct: 488 ELAQRAAGAAKDIKALVSRSGNEVKTGVRLVQETGDALGRIGAKVACINEHMSSIVMAAR 547

Query: 562 EQATGLNEVNTAVNQMDQVTQQNAAMVEQSTAATHSLKGETAELVRLMARFQVGSGSSSY 621
           EQ+TGL E++TAV Q+DQ+TQQNAAMVEQ+ AA+H+L  +  +L  ++ +F+ G    + 
Sbjct: 548 EQSTGLREIDTAVAQLDQMTQQNAAMVEQTNAASHTLAQDAEKLSEIVGQFRHGQARETA 607

Query: 622 ARPA-------VADAGHHAPARNPVAEQQARLNTFARPGRSSGSAALAQAPA 666
            R A          A   APAR   A   A + +  +P  +  S   A +PA
Sbjct: 608 IRTAAIQPPGRAGSATASAPARAATATAAAPV-SLRKPAAAQSSTRPAPSPA 658