Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Caulobacter crescentus NA1000

Subject, 707 a.a., chemoreceptor methyl-accepting chemotaxis transmembrane protein from Sinorhizobium meliloti 1021

 Score =  374 bits (960), Expect = e-108
 Identities = 212/414 (51%), Positives = 280/414 (67%), Gaps = 4/414 (0%)

Query: 206 TAAMSVTIIMSLLTLGAVGAL-AFLTVMTTR---KSINDIAAATDKLSKGDNSIDLEKMT 261
           +A     +  ++ T+ AVGA+ AFL  + +R   + + D+  A +KL+ G   + +    
Sbjct: 278 SAISQFRVAATIATILAVGAMIAFLATLLSRLVIRPVTDMTGAMEKLAAGSLDVTIPGEE 337

Query: 262 RGDELGGIVTALKVFRDNQVHLEQLRADQEKSAALTADERRSKEAAAAAAAQEASLVVSN 321
           R D++G +  A+ VFR N V  ++L  + + + +L+  ER  +EA     A E    V  
Sbjct: 338 RRDQIGSMAAAVAVFRANAVERKRLEDEADSNRSLSERERLEREAQKTRDAAEVQHAVDA 397

Query: 322 LAEGLEKLASGDLTFRVTADFPGDYRKLKDDFNAAMGSLQETMKVIAASTDGLSTGADEI 381
           LA GL +LA GDL +R+ + F     +L++DFN ++  L +T+  + A+   +  GA EI
Sbjct: 398 LATGLGRLADGDLAYRIGSPFADRLDRLREDFNNSVAKLHDTLCAVGANARAIDAGATEI 457

Query: 382 AHASDDLSRRTEQQAASLEETAAALDELTATVRRTAAGARQASDVVSTTRGEATHSGQVV 441
             A+DDL+RRTEQQAAS+EETAAAL+E+T TVR +A  A +   +V+ TR  A  SG+VV
Sbjct: 458 RSAADDLARRTEQQAASVEETAAALEEITTTVRDSAHRAEEVGALVARTRAGAEKSGEVV 517

Query: 442 HQAVSAMGEIEKSSGQISQIIGVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVAQEVR 501
             AV AM  IEKSSG+IS IIGVID+IAFQTNLLALNAGVEAARAGEAG+GFAVVAQEVR
Sbjct: 518 QNAVEAMHAIEKSSGEISNIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVR 577

Query: 502 ALAQRSAEAAKEIKALISSSTQQVSQGVSLVGQTGEALQRIVTKVGEIDALVTEIAASAA 561
            LAQRSA AAKEIKALI++S +QV  GV+LVG TG ALQ IV +V EI+  V+ I  +  
Sbjct: 578 ELAQRSANAAKEIKALITTSGEQVHSGVTLVGDTGRALQAIVAEVQEINKHVSAIVTATR 637

Query: 562 EQATGLNEVNTAVNQMDQVTQQNAAMVEQSTAATHSLKGETAELVRLMARFQVG 615
           EQ+TGL E+NTAVN MDQ TQQNAAMVEQ TAA+H L  E A L  L+A+F +G
Sbjct: 638 EQSTGLQEINTAVNTMDQGTQQNAAMVEQQTAASHGLASEAAALNALLAQFILG 691



 Score = 37.0 bits (84), Expect = 3e-06
 Identities = 59/254 (23%), Positives = 99/254 (38%), Gaps = 32/254 (12%)

Query: 195 ESESAKRQAQATAAMSVTIIMSLLTLGAVGALAFLTVMTTRKSINDIAAATDKLSKGDNS 254
           ++ S +  A A   ++ T+  S      VGAL   T     KS   +  A + +   + S
Sbjct: 471 QAASVEETAAALEEITTTVRDSAHRAEEVGALVARTRAGAEKSGEVVQNAVEAMHAIEKS 530

Query: 255 IDLEKMTRGDELGGIVTALK--VFRDNQVHL----EQLRADQE-KSAALTADERRSKEAA 307
                     E+  I+  +    F+ N + L    E  RA +  K  A+ A E R     
Sbjct: 531 --------SGEISNIIGVIDDIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQR 582

Query: 308 AAAAAQEASLVVSNLAEGLEKLASGDLTFRVTADFPGDYRKLKDDFNAAMGSLQETMKVI 367
           +A AA+E   +++   E   ++ SG           GD  +      A +  + + +  I
Sbjct: 583 SANAAKEIKALITTSGE---QVHSG-------VTLVGDTGRALQAIVAEVQEINKHVSAI 632

Query: 368 AASTDGLSTGADEIAHASDDLSRRT-------EQQAASLEETAAALDELTATVRRTAAGA 420
             +T   STG  EI  A + + + T       EQQ A+    A+    L A + +   G 
Sbjct: 633 VTATREQSTGLQEINTAVNTMDQGTQQNAAMVEQQTAASHGLASEAAALNALLAQFILGE 692

Query: 421 RQASDVVSTTRGEA 434
            QA+   +T+R  A
Sbjct: 693 TQAASYQATSRRRA 706