Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Caulobacter crescentus NA1000

Subject, 890 a.a., methyl-accepting chemotaxis protein from Phaeobacter inhibens DSM 17395

 Score =  344 bits (882), Expect = 1e-98
 Identities = 203/412 (49%), Positives = 268/412 (65%), Gaps = 17/412 (4%)

Query: 218 LTLGAVGALAFLTVMT---TRKSINDIAAATDKLSKGDNSIDLEKMTRGDELGGIVTALK 274
           L + A G L    ++T    ++ +N I+  T++L+ GD S         DE+  I  AL 
Sbjct: 475 LLMMAAGLLVMALLLTHWLVQRPLNAISRTTERLADGDLSPINGFDRTSDEIYRIAQALT 534

Query: 275 VFRDNQVHLEQLRADQEKSAALTADERRSKEAAAAAAAQEASLVVSNLAEGLEKLASGDL 334
           VFRD  V  E L       +  T +ER + +A   AA       V+ +  GL +LA GDL
Sbjct: 535 VFRDGLVEKEAL-------SKATEEERAAHQAQQTAA-------VTAIGNGLARLAQGDL 580

Query: 335 TFRVTADFPGDYRKLKDDFNAAMGSLQETMKVIAASTDGLSTGADEIAHASDDLSRRTEQ 394
           + R+T +    Y +L+ DFN  + +L  T+  +      +  GADEI+ ASDDLSRRTE 
Sbjct: 581 SARITEELTEGYAQLQADFNLTVETLSRTVVDMVDVASSIRNGADEISQASDDLSRRTES 640

Query: 395 QAASLEETAAALDELTATVRRTAAGARQASDVVSTTRGEATHSGQVVHQAVSAMGEIEKS 454
           QAA+LEETAAALDELTA+V+  A GAR         + EA  +G VV+ AVSAM +IE+S
Sbjct: 641 QAATLEETAAALDELTASVKSAADGARAVEATTQDAKSEAVKNGSVVNSAVSAMTDIEES 700

Query: 455 SGQISQIIGVIDEIAFQTNLLALNAGVEAARAGEAGRGFAVVAQEVRALAQRSAEAAKEI 514
           S  I+QIIGVID+IAFQTNLLALNAGVEAARAG+AGRGFAVVA EVR L+QR++EAA EI
Sbjct: 701 SKHIAQIIGVIDDIAFQTNLLALNAGVEAARAGDAGRGFAVVASEVRGLSQRTSEAAMEI 760

Query: 515 KALISSSTQQVSQGVSLVGQTGEALQRIVTKVGEIDALVTEIAASAAEQATGLNEVNTAV 574
           K LIS S+++V  GV LVG+ G AL  IV +VG+I   V+EIA  AA Q+TGL+E+N  +
Sbjct: 761 KTLISESSKKVDYGVELVGKAGTALSDIVAQVGQISQQVSEIADGAASQSTGLHEINIGM 820

Query: 575 NQMDQVTQQNAAMVEQSTAATHSLKGETAELVRLMARFQVGSGSSSYARPAV 626
           +Q+DQVTQQNAAMVE+STAA+H L+G+  +L  L++ F V   ++  A  AV
Sbjct: 821 SQLDQVTQQNAAMVEESTAASHMLRGDATKLAELVSNFTVAEDNAPAAAAAV 872



 Score = 47.4 bits (111), Expect = 3e-09
 Identities = 84/352 (23%), Positives = 151/352 (42%), Gaps = 55/352 (15%)

Query: 189 AANQRIESESAKRQAQATAAMSVTIIMSLLTLGAVGALAFLTVMTTRKSINDIAAATDKL 248
           A ++  E E A  QAQ TAA  VT I + L   A G L+              A  T++L
Sbjct: 545 ALSKATEEERAAHQAQQTAA--VTAIGNGLARLAQGDLS--------------ARITEEL 588

Query: 249 SKG------DNSIDLEKMTRGDELGGIVTALKVFRDNQVHLEQLRAD---QEKSAALTAD 299
           ++G      D ++ +E ++R   +  +V      R+    + Q   D   + +S A T +
Sbjct: 589 TEGYAQLQADFNLTVETLSR--TVVDMVDVASSIRNGADEISQASDDLSRRTESQAATLE 646

Query: 300 ERRSKEAAAAAAAQEASLVVSNLAEGLEKLASGDLTFRVTADFPGDYRKLKDDFN---AA 356
           E        AAA  E +  V + A+G   + +       T D   +  K     N   +A
Sbjct: 647 E-------TAAALDELTASVKSAADGARAVEA------TTQDAKSEAVKNGSVVNSAVSA 693

Query: 357 MGSLQETMKVIAASTDGLSTGADEIAHASDDLSRRTEQQAASLEET----AAALDELTAT 412
           M  ++E+ K IA     +    D+IA  ++ L+     +AA   +     A    E+   
Sbjct: 694 MTDIEESSKHIAQIIGVI----DDIAFQTNLLALNAGVEAARAGDAGRGFAVVASEVRGL 749

Query: 413 VRRTAAGARQASDVVSTTRGEATHSGQVVHQAVSAMGEIEKSSGQISQIIG-VIDEIAFQ 471
            +RT+  A +   ++S +  +  +  ++V +A +A+ +I    GQISQ +  + D  A Q
Sbjct: 750 SQRTSEAAMEIKTLISESSKKVDYGVELVGKAGTALSDIVAQVGQISQQVSEIADGAASQ 809

Query: 472 -TNLLALNAGVEAARAGEAGRGFAVVAQEVRALAQRSAEAAKEIKALISSST 522
            T L  +N G+  ++  +  +  A + +E  A +      A ++  L+S+ T
Sbjct: 810 STGLHEINIGM--SQLDQVTQQNAAMVEESTAASHMLRGDATKLAELVSNFT 859



 Score = 36.6 bits (83), Expect = 5e-06
 Identities = 72/326 (22%), Positives = 125/326 (38%), Gaps = 44/326 (13%)

Query: 294 AALTADERRSKEAAAAAAAQEASLVVSNLAEGLEKLASGDLTFRVTADFPGDYRKLKDDF 353
           A+LTAD   +KEA A A    A L +++ A  L   + G++ +  T     D     D+ 
Sbjct: 417 ASLTADADATKEANATA---NAVLQIASRASLLGSGSRGEIAYMAT-----DIAVTVDEA 468

Query: 354 NAAMGSLQETMKVIAASTDGLSTGADEIAH-----ASDDLSRRTEQQAASLEETAAALDE 408
           +A +    E + ++AA   GL   A  + H       + +SR TE+ A          D 
Sbjct: 469 HANI----ERLLMMAA---GLLVMALLLTHWLVQRPLNAISRTTERLADGDLSPINGFDR 521

Query: 409 LTATVRRTAAGARQASDVVSTTRGEATHSGQVVHQAVSAMGEIEKSSGQISQIIGVIDEI 468
            +  + R A    QA  V           G V  +A+S   E E+++ Q  Q   V    
Sbjct: 522 TSDEIYRIA----QALTVF--------RDGLVEKEALSKATEEERAAHQAQQTAAV---T 566

Query: 469 AFQTNLLALNAGVEAAR-AGEAGRGFAVVAQEVRALAQRSAEAAKEIKALISSSTQQVSQ 527
           A    L  L  G  +AR   E   G+A +  +     +  +    ++  + SS    +  
Sbjct: 567 AIGNGLARLAQGDLSARITEELTEGYAQLQADFNLTVETLSRTVVDMVDVASS----IRN 622

Query: 528 GVSLVGQTGEALQR----IVTKVGEIDALVTEIAASAAEQATGLNEVNTAVNQMDQVTQQ 583
           G   + Q  + L R        + E  A + E+ AS    A G   V            +
Sbjct: 623 GADEISQASDDLSRRTESQAATLEETAAALDELTASVKSAADGARAVEATTQDAKSEAVK 682

Query: 584 NAAMVEQSTAATHSLKGETAELVRLM 609
           N ++V  + +A   ++  +  + +++
Sbjct: 683 NGSVVNSAVSAMTDIEESSKHIAQII 708