Pairwise Alignments

Query, 259 a.a., putative membrane spanning protein from Caulobacter crescentus NA1000

Subject, 247 a.a., membrane protein from Azospirillum brasilense Sp245

 Score = 87.4 bits (215), Expect = 3e-22
 Identities = 85/265 (32%), Positives = 129/265 (48%), Gaps = 45/265 (16%)

Query: 1   MVSLDILASLFVVAALAGALDAIAGGGGLITLPALLLAGLSPVQALGTNKLQGAISALSS 60
           MV+  +L  L   A LAGA++A+AGGG  +TLPAL+ AG+ PV A  T    G ++ L  
Sbjct: 1   MVTTSLL--LLAAAFLAGAMNAVAGGGSFLTLPALIYAGVPPVAANAT----GTVALLPG 54

Query: 61  TSAFARRGLIDWKTALPVAGASALAGL------GGALCASLL--SPEFL-RAVVP-LMLI 110
            ++    G+  ++  L   G   L  L      GG + A+LL  +P+ + R++VP L+L+
Sbjct: 55  YAS----GVYGYRHDLEPVGGVGLVTLSVVSLTGGLIGAALLLVTPDSVFRSIVPWLLLV 110

Query: 111 AIALY-FGLSRAIKAEDV----TPRMALIPFACFVAPLIGFYDGIFGPGAGAFYMVAIVT 165
           A AL+ FG   A +   V    T  M    FA      +  Y G F  G G   ++A ++
Sbjct: 111 ATALFAFGGMLAARLRAVGLHGTGAMLATLFA------VSVYGGYFNGGLGIL-LLAQLS 163

Query: 166 LLGYGALKATAHTKLANAASNLGSLVL-------FTLKGAVVWPVGLVMAAGAFIGAQVG 218
           L G   L A       NA  NL S VL       + + GAV W    +M   A  G  VG
Sbjct: 164 LFGMTNLNAM------NALKNLFSAVLTAIAVAAYAIGGAVEWSYAALMTVAAVAGGYVG 217

Query: 219 SRLAMRFGPKLIRPLLVVISCAMAV 243
           +R+  +   +++R  ++ +  AM+V
Sbjct: 218 ARVGRKIPSRILRAGIIAVGLAMSV 242



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 4/114 (3%)

Query: 6   ILASLFVVAALAGALDAIAGGGGLITLPALLLAGLSPVQALGTNK-LQGAISALSSTSAF 64
           +LA+LF V+   G  +   GG G++ L  L L G++ + A+   K L  A+    + +A+
Sbjct: 136 MLATLFAVSVYGGYFN---GGLGILLLAQLSLFGMTNLNAMNALKNLFSAVLTAIAVAAY 192

Query: 65  ARRGLIDWKTALPVAGASALAGLGGALCASLLSPEFLRAVVPLMLIAIALYFGL 118
           A  G ++W  A  +  A+   G  GA     +    LRA +  + +A+++ F L
Sbjct: 193 AIGGAVEWSYAALMTVAAVAGGYVGARVGRKIPSRILRAGIIAVGLAMSVLFFL 246