Pairwise Alignments

Query, 259 a.a., putative membrane spanning protein from Caulobacter crescentus NA1000

Subject, 257 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  120 bits (302), Expect = 2e-32
 Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 4/235 (1%)

Query: 7   LASLFVVAALAGALDAIAGGGGLITLPALLLA--GLSPVQALGTNKLQGAISALSSTSAF 64
           L  L +VA  AG +DAI GGGGL+  PA+LL          LGT K+        +   +
Sbjct: 5   LILLCLVAFAAGFIDAIVGGGGLLQTPAILLILPHYPVATLLGTTKIPSMAGTTLAAFKY 64

Query: 65  ARRGLIDWKTALPVAGASALAGLGGALCASLLSPEFLRAVVPLMLIAIALY--FGLSRAI 122
           +++   ++K        + LA L GA   S +    ++ V+ ++LI +ALY  F     I
Sbjct: 65  SKQVSFNYKVLAACVLTAFLAALMGAFLVSRIDNSVIKPVILVVLILVALYTYFNKQFGI 124

Query: 123 KAEDVTPRMALIPFACFVAPLIGFYDGIFGPGAGAFYMVAIVTLLGYGALKATAHTKLAN 182
             E        +  A     LIGFYDG+ GPG G+F ++  + +LG+  + A+AH K+ N
Sbjct: 125 HQEKDHSLKQQVLMAALFGILIGFYDGLIGPGTGSFLILVFIAVLGFDFIGASAHAKIVN 184

Query: 183 AASNLGSLVLFTLKGAVVWPVGLVMAAGAFIGAQVGSRLAMRFGPKLIRPLLVVI 237
            A+NL +++ F+  G +++   + MA     GA  G++LA+  G K +R   +++
Sbjct: 185 MATNLAAIIYFSSTGHILFQYAIPMALFNLTGAFFGTKLALLKGNKFVRVFFLIV 239



 Score = 36.2 bits (82), Expect = 7e-07
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 138 CFVAPLIGFYDGIFGPGAGAFYMVAIVTLLG-YGALKATAHTKLANAASNLGSLVLFTLK 196
           C VA   GF D I G G G     AI+ +L  Y        TK+ + A    +   ++ +
Sbjct: 9   CLVAFAAGFIDAIVG-GGGLLQTPAILLILPHYPVATLLGTTKIPSMAGTTLAAFKYSKQ 67

Query: 197 GAVVWPVGLVMAAGAFIGAQVGSRLAMRFGPKLIRPLLVVISCAMAV 243
            +  + V       AF+ A +G+ L  R    +I+P+++V+   +A+
Sbjct: 68  VSFNYKVLAACVLTAFLAALMGAFLVSRIDNSVIKPVILVVLILVAL 114



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 6   ILASLFVVAALAGALDAIAGGG--GLITLPALLLAGLSPVQALGTNKLQGAISALSSTSA 63
           ++A+LF +  L G  D + G G    + L  + + G   + A    K+    + L++   
Sbjct: 137 LMAALFGI--LIGFYDGLIGPGTGSFLILVFIAVLGFDFIGASAHAKIVNMATNLAAIIY 194

Query: 64  FARRGLIDWKTALPVAGASALAGLGGALCASLLSPEFLRAVVPLMLIAIALYF 116
           F+  G I ++ A+P+A  +      G   A L   +F+R    +++    L F
Sbjct: 195 FSSTGHILFQYAIPMALFNLTGAFFGTKLALLKGNKFVRVFFLIVVFGTILRF 247