Pairwise Alignments

Query, 419 a.a., ornithine decarboxylase from Caulobacter crescentus NA1000

Subject, 398 a.a., Ornithine decarboxylase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  122 bits (305), Expect = 3e-32
 Identities = 113/345 (32%), Positives = 164/345 (47%), Gaps = 33/345 (9%)

Query: 43  VFYAVKANPSPWVIRELAKAGVRSFDVASLNEVEL-VANEAPGSRMAFMHPVKSRAAISA 101
           + YA+KANP+P ++R LA  G   FD AS  E+EL +A  A  +R++F + +K  + I+ 
Sbjct: 66  IHYAMKANPAPEILRALAAEGC-GFDAASRGEIELALAAGATAARISFGNTIKRPSDIAF 124

Query: 102 AYFDHGVKTFSFDTHEELAKILDATGQAKDLNLIVRMGVQAEGAAYSLSGKFGVEMHNAP 161
           A+  HG+  F+ D   EL KI      A    + +R+ V A GA + LS KFG     A 
Sbjct: 125 AHA-HGIDLFAADAEAELDKI---AAHAPGARVFLRVLVGATGADWPLSRKFGCAPDTAL 180

Query: 162 DLLLAARRATQDLMGVSFHVGSQCMRPTAFQAA---MAQASRALVRAGVLADVVDVGGGF 218
            L+  A       +G+SFHVGSQ   P  +      MA+   A    G   +++++GGGF
Sbjct: 181 RLMDRAAFLGLRPVGLSFHVGSQTRDPGMWSDTLDQMAEIWHAGRARGHDLNLINIGGGF 240

Query: 219 PSIY--PGMVPPDLSEYLAAIDRG-FAEMMVHETTELWCEPGRALVAEASSLLVKVEL-- 273
           P+ Y  P +     +  + A+ R  F +  V        EPGR LVAEA  ++ +V L  
Sbjct: 241 PAFYGDPILEAETYAGRVGALVRARFGDATV------MAEPGRGLVAEAGMIVAEVLLVS 294

Query: 274 -KKGDAL----YLNDGSYGSLFDAAHMKWPFPVKLYRKSGEVVEEGLKPFRFYGPTCDSV 328
            K  D L    YL+ G +  L +       +        GE       P    GP+CDS 
Sbjct: 295 RKSEDDLCRWVYLDIGKFSGLAETMEEAIRYQFVTPHDGGET-----GPCIMAGPSCDSA 349

Query: 329 D--HMPGPFYLPESVDEGDYIEIGMLGAYGVAMNT-RFNGFGETD 370
           D  +   P +LP ++  GD I I   GAY    ++  FNGF   D
Sbjct: 350 DVLYEQRPVHLPMALQSGDRILIKATGAYTTTYSSVGFNGFPPLD 394