Pairwise Alignments

Query, 419 a.a., ornithine decarboxylase from Caulobacter crescentus NA1000

Subject, 414 a.a., diaminopimelate decarboxylase (RefSeq) from Shewanella sp. ANA-3

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 96/340 (28%), Positives = 153/340 (45%), Gaps = 33/340 (9%)

Query: 43  VFYAVKANPSPWVIRELAKAGVRSFDVASLNEVELVANEAPG--SRMAFMHPVKSRAAIS 100
           V YAVKAN +  V+  LA+ G   FD+ S  E+  V  EA G  +++ F    K+ A + 
Sbjct: 55  VCYAVKANSNLAVLNVLARLG-SGFDIVSGGELARVI-EAGGDPAKVVFSGVGKTVAEME 112

Query: 101 AAYFDHGVKTFSFDTHEELAKILDATGQ---AKDLNLIVRMGVQAEGAAYSLSG----KF 153
            A  + G+  F+ ++  EL ++ D  G+      ++L V   V A    Y  +G    KF
Sbjct: 113 QA-LNLGIYCFNVESSAELEQLNDVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKF 171

Query: 154 GVEMHNAPDLLLAARRATQDLM--GVSFHVGSQCMRPTAFQAAMAQASRALVRA---GVL 208
           G+ M  A +++ A   A   L   GV  H+GSQ      F  AM +    + R    G++
Sbjct: 172 GIAMDEA-EVVFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLADQGIV 230

Query: 209 ADVVDVGGGFPSIYPGMVPPDLSEYLAAIDRGFAEMMVHETTELWCEPGRALVAEASSLL 268
            +  DVGGG    Y    PP    Y AA+     +  +    +L  EPGRA+ A A   +
Sbjct: 231 IEHFDVGGGLGVTYDDETPPHPDVYAAALLARLGDRKL----KLIFEPGRAIAANAGIFV 286

Query: 269 VKVELKKGDA---LYLNDGSYGSLF-DAAHMKWPFPVKLYRKSGEVVEEGLKPFRFYGPT 324
            +V   K ++     + DG+   L   A +  W   + +  +     +E  + F   GP 
Sbjct: 287 TQVLYLKENSDKRFAIVDGAMNDLIRPALYSAWQNIIPVNPR-----DEQAQVFDIVGPV 341

Query: 325 CDSVDHMPGPFYLPESVDEGDYIEIGMLGAYGVAMNTRFN 364
           C++ D +     L  ++  GD + +   GAYG AM + +N
Sbjct: 342 CETGDFLGKDRAL--AIAAGDLLVVRSSGAYGFAMASNYN 379