Pairwise Alignments

Query, 364 a.a., O-antigen acetylase from Caulobacter crescentus NA1000

Subject, 382 a.a., acyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 58.2 bits (139), Expect = 4e-13
 Identities = 71/323 (21%), Positives = 134/323 (41%), Gaps = 38/323 (11%)

Query: 6   HVKPLTALRFFAAFWVVLYHYWPNLDVGFTPAIASKGYLGVEAFFVLSGFILCHVYLAGF 65
           H   L  LR  AA  V+ YH +            + GYL V+ FF+LSGF++ + Y   +
Sbjct: 15  HYVLLDGLRGVAALLVIWYHVFEGFATSPIDQKFNHGYLAVDFFFILSGFVIGYAYDDRW 74

Query: 66  GEGRFRYGDFLWNRLARVYPL-HLATLVGVGAMALAG-----------AVAGLAVDPNIL 113
            +      +F   RL R++P+  +  ++G     + G           ++  +A+  N+ 
Sbjct: 75  -KTTMTQKEFFKRRLIRLHPMVVMGAVLGAITFCIQGCEQWDGTRVSISMVMVAMLLNLF 133

Query: 114 SWPSLPANLLLVHAWGLAPVAGWNHASWSISAEWFAYLTFPVFAFAAWRLRSRPLVAVLA 173
             P++P     V   G   +   N  SWS+  E+   + + +F       ++  ++ V+A
Sbjct: 134 LIPAVPGTGPEVR--GNGEMYPLNGPSWSLFFEYIGNILYALF-IRRMSTKALTILVVIA 190

Query: 174 ALAL----IAVIYPVFEALAGFSLTEATIRWGALRIVPCFAYGCALHALWRSGRFPTRLA 229
            + L    I  +        G+S+ +  +  G LR++  F+ G  +  +++    P  + 
Sbjct: 191 GIGLASFSICNLSGSHHLGVGWSMIDYNLIGGFLRMLFAFSIGLLMSRIFK----PVHIK 246

Query: 230 GPGAAVLGLAILAAIQL------------GAPDLSIVMLLGGLIFMLASLASAGSRFATQ 277
           G    +  L+IL  + +            G  D    +L+  L+  L +      +  T 
Sbjct: 247 G-AFWICSLSILILLTMPYVGGETSPWMNGIYDAVCTILIFPLLVYLGASGKTTDK-GTA 304

Query: 278 KTFVYLGEISYSTYMICIPWKIL 300
           K   +LG+ISY  Y+I  P+  L
Sbjct: 305 KICKFLGDISYPVYIIHYPFMYL 327