Pairwise Alignments

Query, 308 a.a., methionyl-tRNA formyltransferase from Caulobacter crescentus NA1000

Subject, 311 a.a., methionyl-tRNA formyltransferase from Rahnella sp. WP5

 Score =  214 bits (546), Expect = 2e-60
 Identities = 121/296 (40%), Positives = 173/296 (58%), Gaps = 5/296 (1%)

Query: 1   MRIAFLGTPDFAVTCLAELVASGHEIVCVYSQPPAPRGRGQDLKPSPVHAFAEGLGLPVR 60
           MRI F GTPDFA   L  L++S +++V V++QP  P GRG  L  SPV   A+   +PV 
Sbjct: 1   MRIIFAGTPDFAARHLDALLSSENQVVGVFTQPDRPAGRGNKLTASPVKVLAQTHDIPVF 60

Query: 61  TPVSMKTPEEIAAFQALDLDAAVVVAFGQILVKDVLEAPKHGCFNLHASLLPRWRGAAPI 120
            P S++  E  +   AL  D  VVVA+G IL K VL+ PK GC N+H SLLPRWRGAAPI
Sbjct: 61  QPKSLRPEENQSLVSALKADIMVVVAYGLILPKAVLDMPKLGCINVHGSLLPRWRGAAPI 120

Query: 121 QRAIMAGDAVTGVQVMRMSEGLDEGPILMSQQVAIADDDTAASLHDKLAAVGARLLPVAL 180
           QR++ AGD  TG+ +M+M  GLD G +L   +  I  +DT+ASL++KLA +G + +   L
Sbjct: 121 QRSLWAGDTKTGITIMQMDVGLDTGDMLHKVECDILPEDTSASLYNKLAELGPQGMLETL 180

Query: 181 AAIEREVVQETPQAEDGVTYAKKIKSAEARIDWTRPAAEIDRHIRGLSPFPGAWFEAPSE 240
             +     +   Q+E+ VTYA+K+   EAR+DW   A +++R IR  +P+P ++F    +
Sbjct: 181 QQLANGSAKPEVQSEEHVTYAEKLSKEEARLDWNLSAEQLERCIRAFNPWPVSFFMIDDQ 240

Query: 241 KGPVRV---KALLSRVEAASGVAGTTLDDALLIACGEGSIRLLKAQREGKGVQDAQ 293
             PV+V   + L  +  AA G         + IA  +G + + + Q  GK    AQ
Sbjct: 241 --PVKVWQAECLSGKSSAAPGTIVAADKKGIQIATSDGILNITQLQPSGKKAMSAQ 294