Pairwise Alignments

Query, 308 a.a., methionyl-tRNA formyltransferase from Caulobacter crescentus NA1000

Subject, 299 a.a., methionyl-tRNA formyltransferase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  314 bits (805), Expect = 1e-90
 Identities = 169/301 (56%), Positives = 209/301 (69%), Gaps = 7/301 (2%)

Query: 1   MRIAFLGTPDFAVTCLAELVASGHEIVCVYSQPPAPRGRGQDLKPSPVHAFAEGLGLPVR 60
           MR+ F+GTP F+V  L  LVA+GHE+  VY QPP P GRG+  +PSPV A AE LGL VR
Sbjct: 1   MRLVFMGTPAFSVPVLDALVAAGHEVAAVYCQPPRPAGRGKKPRPSPVQARAEVLGLAVR 60

Query: 61  TPVSMKTPEEIAAFQALDLDAAVVVAFGQILVKDVLEAPKHGCFNLHASLLPRWRGAAPI 120
            PVS+K  E  A F AL  + AVVVA+G IL + VL+AP+HGC+N+HASLLPRWRGAAPI
Sbjct: 61  HPVSLKGAEAQADFAALGAEIAVVVAYGLILPQAVLDAPEHGCWNIHASLLPRWRGAAPI 120

Query: 121 QRAIMAGDAVTGVQVMRMSEGLDEGPILMSQQVAIADDDTAASLHDKLAAVGARLLPVAL 180
            RAI+AGDA TGV +M+M  GLD GP+L+ + VAI  ++T   LHD+L+A+GARL+  AL
Sbjct: 121 HRAILAGDAETGVCIMQMEAGLDTGPVLLREAVAIGAEETTGGLHDRLSALGARLIVEAL 180

Query: 181 AAIEREVVQETPQAEDGVTYAKKIKSAEARIDWTRPAAEIDRHIRGLSPFPGAWFEAPSE 240
           A    E+V E PQ E GVTYA KI  AEAR+DW+RPA E+DR IRGLSP PGAW E   E
Sbjct: 181 AR-RAELVPE-PQPEVGVTYAAKIDKAEARVDWSRPAVEVDRLIRGLSPVPGAWCEIAGE 238

Query: 241 KGPVRVKALLSRVEAASGVAGTTLDDALLIACGEGSIRLLKAQREGKGVQDAQTFTRGFP 300
               RVK L SR+   SG AG  L +   +ACG G++ + +AQR G+   DA    RG  
Sbjct: 239 ----RVKLLGSRLAEGSGAAGQVL-EGFTLACGVGAVEITRAQRAGRKAADAAEILRGMT 293

Query: 301 I 301
           +
Sbjct: 294 L 294