Pairwise Alignments

Query, 308 a.a., methionyl-tRNA formyltransferase from Caulobacter crescentus NA1000

Subject, 318 a.a., methionyl-tRNA formyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  209 bits (533), Expect = 5e-59
 Identities = 116/288 (40%), Positives = 163/288 (56%), Gaps = 1/288 (0%)

Query: 1   MRIAFLGTPDFAVTCLAELVASGHEIVCVYSQPPAPRGRGQDLKPSPVHAFAEGLGLPVR 60
           + I F GTPDFA   L  L+ S H ++ VY+QP  P GRG+ L  SPV   A    +PV 
Sbjct: 4   LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELAVSHDIPVY 63

Query: 61  TPVSMKTPEEIAAFQALDLDAAVVVAFGQILVKDVLEAPKHGCFNLHASLLPRWRGAAPI 120
            P S++         AL+ D  VVVA+G IL K VL+ P+ GC N+H S+LPRWRGAAPI
Sbjct: 64  QPGSLRKEPAQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWRGAAPI 123

Query: 121 QRAIMAGDAVTGVQVMRMSEGLDEGPILMSQQVAIADDDTAASLHDKLAAVGARLLPVAL 180
           QRA+ AGD  TGV +M+M  GLD G +L+   + I DDDT+A+L++KLA  G   L  AL
Sbjct: 124 QRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSATLYEKLALQGPDALLQAL 183

Query: 181 AAIEREVVQETPQAEDGVTYAKKIKSAEARIDWTRPAAEIDRHIRGLSPFPGAWFEAPSE 240
             +    +    Q E    YA+K+   EAR+DW + A ++ + +R  +P+P ++FE    
Sbjct: 184 EGLANGTLTAEKQDEVLANYAEKLSKEEARLDWRKSATQLWQEVRAFNPWPVSYFEHQGN 243

Query: 241 KGPV-RVKALLSRVEAASGVAGTTLDDALLIACGEGSIRLLKAQREGK 287
              V + +   +   AA G   +     + +A G+G + LL  Q  GK
Sbjct: 244 TIKVWQTQVSTTSSNAAPGTIISASKKGIEVATGDGVLTLLSMQLPGK 291