Pairwise Alignments

Query, 481 a.a., transposase, DDE family from Caulobacter crescentus NA1000

Subject, 456 a.a., Transposase and inactivated derivatives from Pseudomonas stutzeri RCH2

 Score =  102 bits (253), Expect = 4e-26
 Identities = 117/476 (24%), Positives = 195/476 (40%), Gaps = 64/476 (13%)

Query: 22  LDDYVAEENPVRVVDVFVDDLDLGTLGFEGLTPAVTGRPAYHPAMLLKLYVYGYLNKVQS 81
           L+D+V  ++ +R +D  +D  DL     +  +P   GRP+  P +++++ V GY   ++S
Sbjct: 18  LEDHVPAQHLLRSIDQCLDLSDLRAYLADFYSPI--GRPSIDPELMVRMLVVGYCYGIRS 75

Query: 82  SRRLEREARRNVELMWLTGRL-----APDHKTIADFRKD---NGPAIQAACAQFVVLCRQ 133
            RRL  E   N+   W   RL      P+H T +  R     +    +    + +  C  
Sbjct: 76  ERRLCEEVHLNLAYRWFC-RLGLEDEVPNHSTFSKNRHGRFRDSDLFRWLFNEVLRRCMA 134

Query: 134 IGLFGAALVAIDGSKFKAVNTRDKNFTANKLKKRLEQVAEHIAGYLRDLDTADRQEGEAA 193
            GL      A+D S  KA  +R +    +                  ++D +D       
Sbjct: 135 AGLVKGEGFAVDASIIKADASRQRGVVGD------------------EVDWSD------P 170

Query: 194 ETRSERLKEKVERLREQMRWLQTMEAKVAASPDGQVSLTDPDARSMATTGRGSGMVGYNV 253
           +  S  ++E +E L E        +A   A P  ++SLTDP +R  A  G G     Y+ 
Sbjct: 171 KLSSRAVREYLEALDE--------DALAEALPK-KISLTDPQSRWTAAPG-GPAFFAYST 220

Query: 254 QSAVETEHHLIVAHDVVMTGSDR----QQLSSMAARTKDALGVETLDVLADRGYFSGEEI 309
              ++TEH +I+  DV  T + R        +M  R +    +    ++ D  Y +   +
Sbjct: 221 NYLIDTEHGVIM--DVEATPAHRTTEVDSTRTMVERVEAQFDLTPERLIGDTAYGTAPML 278

Query: 310 L-ACEALGVTPYVPRPLTSGAKANGRFGKQDFVYLPEQDVYRCPSGALL-------PRHM 361
               E   + P+VP       + +      DF +  E D YRCP+G  L        +  
Sbjct: 279 AWMVEEKDIEPHVP-VWDKTERKDDSLSSNDFHWNQEADEYRCPTGKPLRSEWRAFTQKR 337

Query: 362 TNVENGMTLHRYWDHFSCQSCALKPQCTPSIA-RRVTRWEHEAVIDAMQRRMDLTPGAM- 419
           + V    T+        C +C LK +C P+   R++ R  HEA  D + RR+  TP  + 
Sbjct: 338 SRVTKANTIIYRSSQTDCVTCPLKAKCCPNTPNRKIVRSIHEAARD-VARRIAKTPEYLV 396

Query: 420 -RQRRRTVEHPFGTIKAWMGSTHFLMKRLPNVKTEIGLHILAYNLKRVIAILGVGP 474
            R  R+ VE  F  +K  M      ++ L     E  +  +  NL+R+  +L  GP
Sbjct: 397 SRCERKKVEMLFAHLKRIMKLDRLRLRGLTGATDEFTMAAMVQNLRRMAKLLPQGP 452