Pairwise Alignments

Query, 481 a.a., transposase, DDE family from Caulobacter crescentus NA1000

Subject, 268 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  113 bits (282), Expect = 9e-30
 Identities = 81/251 (32%), Positives = 120/251 (47%), Gaps = 5/251 (1%)

Query: 232 TDPDARSMATTGRGSGMVGYNVQSAVETEHHLIVAHDVVMTGSDRQQLSSMAARTKDALG 291
           +D +AR M T  R   +  YNVQS V+++HHLI A  V    +D + L       ++ L 
Sbjct: 12  SDREARLMKT--RNGFVPAYNVQSVVDSQHHLIGAMQVTDHPNDFEDLQPSIHAMQEDLQ 69

Query: 292 VETLDVLADRGYFSGEEILACEALGVTPYVPRPLTSGAKANGRFGKQDFVYLPEQDVYRC 351
           VE    +AD GY + E+ILA E  G    VP      +    R     F Y  + D Y C
Sbjct: 70  VEVSQAVADTGYANEEQILALEEEGKVIAVPFNEGDHSPKEDREHGIFFTYDADNDYYIC 129

Query: 352 PSGALLPRHMTNVENGMTLHRYWDHFSCQSCALKPQCTPSIARRVT--RWEHEAVIDAMQ 409
               +LP     V     ++R +    C+ C L   CT S   R+   R + E +   M+
Sbjct: 130 SQEKILPIKDRQVRKHGKIYRKYQGRDCKGCPLIKFCTTSKKGRIIYRRADAEPIRQYMK 189

Query: 410 RRMDLTPGAMRQRRRT-VEHPFGTIKAWMGSTHFLMKRLPNVKTEIGLHILAYNLKRVIA 468
           +   +   A+ + R+T VEHPFGT+K WMG    L++    V+ EI L+   YNL+RV  
Sbjct: 190 KCKGMKYKALIRLRKTWVEHPFGTLKYWMGQIPLLLRGKEKVQAEIDLYATCYNLRRVTN 249

Query: 469 ILGVGPLMKAI 479
           I  +  L++ +
Sbjct: 250 IQSIQVLLQQV 260