Pairwise Alignments

Query, 300 a.a., RarD family membrane permease from Caulobacter crescentus NA1000

Subject, 303 a.a., EamA family transporter RarD from Lysobacter sp. OAE881

 Score =  229 bits (585), Expect = 5e-65
 Identities = 126/289 (43%), Positives = 181/289 (62%), Gaps = 6/289 (2%)

Query: 8   ESRSAYAAGVGCYLLWGFLPLYFHLLAKLGVTSWEMIAHRSLWSVLWALGLVLIARQVGQ 67
           ++R+        ++LWG +PLY+HLL    V S +++ HR +WS L   G +   +  G 
Sbjct: 6   DTRNGLWIAAASFVLWGLMPLYWHLLKN--VPSLQIVLHRIVWSALLVAGWLGWKQGRGW 63

Query: 68  VAQVLRQPKTLGVLALTTLAIFSNWTIYVFAVNAGHVIEASLGYYINPLMNMAAGALLFR 127
           +   L +P+  G+LAL+ + I  NW +Y++AVNAGHV+E+SLGY+INPL+++  G +   
Sbjct: 64  LKATLARPRAAGMLALSGVLIAFNWGLYIWAVNAGHVVESSLGYFINPLISVVLGVVFLH 123

Query: 128 ERMSTEGKVAIGLAAVGVAIQTVALGHLPIVSLGLALTFCVYAILRKQVKADAQTGLFIE 187
           ER++    +++ +AA GVA  T   G  P ++LGLAL+F +Y ++RK V  DA +GL +E
Sbjct: 124 ERLNRVQWLSVAIAATGVAWLTWQYGQPPWIALGLALSFGLYGLIRKLVAVDAVSGLAVE 183

Query: 188 CAYLALPGLAYVWFLQSSGQGHFGDGASVT--TLLALAGPATVVPLALFAWSARRLPLSA 245
             YL LP LA + + ++ G G FG G  +    LL  AG  T +PL  FA++ RR PLS 
Sbjct: 184 GVYLFLPALALLLWSETHGGGGFGGGYGLVADVLLIFAGVLTALPLIGFAYAVRRAPLSV 243

Query: 246 VGFLQFIAPTIQFLLGVA-FGEPFTPLRALSFVFIWLGVATFA-YGAWR 292
           VG +Q+IAPTIQFLLGV  F E F   RA  FVFIW+ +A FA  G WR
Sbjct: 244 VGLMQYIAPTIQFLLGVLFFNEAFDRDRATGFVFIWIALAIFAGEGLWR 292