Pairwise Alignments

Query, 420 a.a., poly(3-hydroxyalkanoate) depolymerase from Caulobacter crescentus NA1000

Subject, 425 a.a., polyhydroxyalkanoate depolymerase, intracellular (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  277 bits (708), Expect = 5e-79
 Identities = 148/356 (41%), Positives = 202/356 (56%), Gaps = 8/356 (2%)

Query: 55  RRYGKPKWNIDKVKVGQV-DVRVRPTVVWESPWARLVQFDRDMADMRRAGKFSLDPAVLI 113
           R   KP W I  V      D  V   +V   P+  L++F+         G+      VL+
Sbjct: 57  RMVTKPDWGIRSVVAEDGRDHLVETEIVVARPFGDLIRFNV-------LGRPKKRRKVLL 109

Query: 114 VAPLSGHYATLLRGTVEAFLPDHAVFIVDWVNAREVSVLEGRFDFHDYIDHVIQMLEVLG 173
           VAP+SGHYATLLR TV + LPD  V+I DW NAR++ V +G+FD  DY  +++  ++V+G
Sbjct: 110 VAPMSGHYATLLRSTVLSLLPDCEVYITDWHNARDIPVSQGKFDVEDYTLYLVDFMKVMG 169

Query: 174 PRPNVVAVCQPGPPVLAAAALMAEQNHPSRPASMTFMGSPIDARLSPTVTNQLAEEKPFT 233
           P  +V+AVCQP P  LAA A +A +   ++P S+T +G PID   +PT            
Sbjct: 170 PETHVIAVCQPAPLTLAATAYLAAEEPDAQPRSLTLIGGPIDPDATPTEVTDFGNRVTMG 229

Query: 234 WFQSNMIYNVPPPYAGAGRRVYPGFVQLASFMSMNADRHQEAHRRYFNHLVSGDGDSADK 293
             +  M+  V   YAG GR VYPG +QLASFMSMNA+RH +A          G+    D 
Sbjct: 230 QLEQTMLQRVGFKYAGVGRMVYPGLLQLASFMSMNAERHSKAFTDQVVRAAKGEAADHDA 289

Query: 294 HLEFYDEYLSVLDLTEEFYLQTIDIVFQQYLLPKGELVHRGTRVKPEVITDIGLMTVEGE 353
           H  FYDEYL+V+D+T EFYL T++ +F+   + K E V  G  V    IT + + TVEG 
Sbjct: 290 HNRFYDEYLAVMDMTAEFYLSTVERIFKNREIAKNEFVVNGVHVDIGKITTVAVKTVEGM 349

Query: 354 NDDISGIGQTQAAHGLCANIPEDMKLDYVQPSVGHYGVFNGRRFREEIYPRVRKFI 409
           +DDIS  GQ  AA  LC  +P+  K  +++P  GHYG+F GR +R  I P V +FI
Sbjct: 350 DDDISAPGQCVAALDLCTGLPQSKKASHLEPGAGHYGIFAGRSWRNNIRPLVLEFI 405