Pairwise Alignments

Query, 491 a.a., type II secretion pathway protein E from Caulobacter crescentus NA1000

Subject, 575 a.a., General secretion pathway protein E from Xanthomonas campestris pv. campestris strain 8004

 Score =  369 bits (947), Expect = e-106
 Identities = 215/469 (45%), Positives = 294/469 (62%), Gaps = 19/469 (4%)

Query: 24  RAVIGVREGYDPMALVEIRRAVGAPLAIEPMTAPVFDRKFSEVYAGAGLATASSADSLDL 83
           R  + + + YD  A+  +R A G PL ++       D      Y     A  +  ++ D 
Sbjct: 113 RLDLWIADPYDDYAIDAVRLATGLPLLLQVGLRSEIDDLIERWYGQGRSAMGTIVETAD- 171

Query: 84  EGGLGLLLEDMPAAADLLDPQDDAPVIRLINGLIAEAVRLGASDIHIEPFEKALIVRLRI 143
             G     +D+ A  DL     +APVIRL+N +I  AV L ASDIHIEPFE  L VR R+
Sbjct: 172 --GDASSTDDIEALRDLAS---EAPVIRLVNLVIQHAVELRASDIHIEPFESRLKVRYRV 226

Query: 144 DGVLTEVLSLSPRIAAMLVSRVKVMAKLDIAEKRVPQDGRISLALGGKSLDVRVSTLPAR 203
           DGVL E  S   ++ A ++SR+K+MAKL+IAE+R+PQDGRI L + GK LD+RVST+P  
Sbjct: 227 DGVLVEGESPPAKLTAAVISRIKIMAKLNIAERRLPQDGRIMLRVQGKELDLRVSTVPTA 286

Query: 204 MGERVVMRILDKDQAGLRLSDLGMSPDVLSALETAVREPHGIILVTGPTGSGKTTTLYAA 263
            GE VVMR+LD++        LG + D L      + +PHGI+LVTGPTGSGKTTTLY A
Sbjct: 287 HGESVVMRLLDRETVVFDFYKLGFTEDFLPQFRKVLEQPHGIMLVTGPTGSGKTTTLYTA 346

Query: 264 LAVLNDNSRNILTIEDPVEYAVHGIGQTQVNTKVGMTFAAGLRAILRQDPDVVMVGEIRD 323
           L+ LN +   I+T+EDPVEY + GI Q Q   ++G+ FA  LR+I+RQDPD++M+GE+RD
Sbjct: 347 LSQLNTSDVKIITVEDPVEYQIEGINQIQAKPQIGLDFANALRSIVRQDPDIIMIGEMRD 406

Query: 324 SETAQIAVQASLTGHLVLSTVHTNDAAGAVVRLRDMGVEPFLLASTLRLVIAQRLVRRLC 383
            ETA+IA+Q++LTGHLVLST+HTN+AAG + RL DMGVE +LL ST+  ++AQRLVR+L 
Sbjct: 407 LETARIAIQSALTGHLVLSTLHTNNAAGGITRLLDMGVEDYLLTSTINGILAQRLVRKLD 466

Query: 384 -----EHCRTPEPADAATAALVGLPEGEI-LYRPVGCAHCGHTGYQGRIGVYEALRVDDH 437
                 +  +PE  +      +  P+GEI LYRP   A    TGY GR  + E L ++D 
Sbjct: 467 LANAERYAASPEEIERFDLRRL-QPDGEIFLYRPRATA-AAPTGYLGRTTIVEFLVMNDE 524

Query: 438 LRRLI----GGNASEQEITEAGLDRRLGQEARNYVLAGLTTVEEALRIT 482
           LRR +    G    EQ   ++G+ R + ++  +  L G TT+EE LR+T
Sbjct: 525 LRRAVMRRAGMGEIEQLARKSGM-RTMYEDGLSKALRGETTIEEVLRVT 572