Pairwise Alignments

Query, 491 a.a., type II secretion pathway protein E from Caulobacter crescentus NA1000

Subject, 577 a.a., Type IV fimbrial assembly, ATPase PilB from Xanthomonas campestris pv. campestris strain 8004

 Score =  354 bits (909), Expect = e-102
 Identities = 215/487 (44%), Positives = 290/487 (59%), Gaps = 21/487 (4%)

Query: 12  KRNGVVLLSLGERAVIGVREGYDPMALVEIRRAVGAPLAIEPMTAPVFD-RKFSEVYAGA 70
           K   + L   G R  +GV       AL +I+      L +EP+       R+  E +  +
Sbjct: 94  KHQVLPLFKRGNRLFVGVSNPTQTRALDDIKFHTN--LVVEPILVDEDQIRRTLEQWQAS 151

Query: 71  GLATASS-ADSLDLEGGLGLLL--EDMPAAADL-LDPQ-DDAPVIRLINGLIAEAVRLGA 125
             A  SS  D  D  G L +    EDM A  D  +D + DD PV++ +N ++ +A+R GA
Sbjct: 152 NAALGSSLGDDDDEMGDLDVSTGDEDMGAGGDSGVDAKGDDTPVVKFVNKVLVDAIRRGA 211

Query: 126 SDIHIEPFEKALIVRLRIDGVLTEVLSLSPRIAAMLVSRVKVMAKLDIAEKRVPQDGRIS 185
           SDIH EP+E    VRLRIDG+L  V     ++   + +R+KVM++LDIAEKRVPQDGRI 
Sbjct: 212 SDIHFEPYEDDYRVRLRIDGLLKNVAKAPVKLNQRIAARLKVMSQLDIAEKRVPQDGRIK 271

Query: 186 LALGG-KSLDVRVSTLPARMGERVVMRILDKDQAGLRLSDLGMSPDVLSALETAVREPHG 244
           L L   K +D RVSTLP   GE+VV+RILD   A L +  LG   D       A+ +P+G
Sbjct: 272 LNLSKTKQIDFRVSTLPTLFGEKVVLRILDASAAKLGIEKLGYEADQQKLFLDAIHKPYG 331

Query: 245 IILVTGPTGSGKTTTLYAALAVLNDNSRNILTIEDPVEYAVHGIGQTQVNTKVGMTFAAG 304
           ++LVTGPTGSGKT +LY AL +LND +RNI T EDPVE  + G+ Q Q N K GMTFAA 
Sbjct: 332 MVLVTGPTGSGKTVSLYTALGILNDETRNISTAEDPVEIRLPGVNQVQQNVKRGMTFAAA 391

Query: 305 LRAILRQDPDVVMVGEIRDSETAQIAVQASLTGHLVLSTVHTNDAAGAVVRLRDMGVEPF 364
           LR+ LRQDPD++MVGEIRD ETA+IA++A+ TGH+VLST+HTNDA   + RL +MG+ P+
Sbjct: 392 LRSFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVLSTLHTNDAPQTIARLMNMGIAPY 451

Query: 365 LLASTLRLVIAQRLVRRLCEHCRTPEPADAATAALVGLPEGEI----LYRPVGCAHCGHT 420
            + S++ LVIAQRL RRLC +C+             G    ++    LY  VGC  C   
Sbjct: 452 NITSSVTLVIAQRLARRLCNNCKRKSTLPEHALLAEGFTPEQVANIELYEAVGCDECTE- 510

Query: 421 GYQGRIGVYEALRVDDHLRRLI--GGNASEQEITEAGLD---RRLGQEARNYVLAGLTTV 475
           GY+GR G+Y+ + + D +  ++  GGNA   +I EA      R L Q A      G+T++
Sbjct: 511 GYKGRTGIYQVMPMTDEIGAIVLEGGNA--MQIAEAAQKIGIRDLRQSALMKASHGVTSL 568

Query: 476 EEALRIT 482
            E  R+T
Sbjct: 569 AEINRVT 575