Pairwise Alignments

Query, 491 a.a., type II secretion pathway protein E from Caulobacter crescentus NA1000

Subject, 487 a.a., Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB from Sphingomonas koreensis DSMZ 15582

 Score =  441 bits (1134), Expect = e-128
 Identities = 250/486 (51%), Positives = 321/486 (66%), Gaps = 10/486 (2%)

Query: 6   LAYGFAKRNGVVLLSLGERAVIGVREGYDPMALVEIRRAVGAPLAIEPMTAPVFDRKFSE 65
           L YG+A+R GVVL +  +      R      AL+E++R   A   +    A  FD+  + 
Sbjct: 7   LPYGYARRAGVVLRAGSDGLECVHRPDAALDALLEVQRIAPAARFVAVEDA-AFDQALAA 65

Query: 66  VYAGAGLATASSADSLDLEG-GLGLLLEDMPAAADLLDPQDDAPVIRLINGLIAEAVRLG 124
            Y+G+    A +A   DL G  L  L +   A  DLLD +DD+PVIRLIN L+ EAV+ G
Sbjct: 66  SYSGS----AGAAAEFDLGGMDLAALADSAAAVDDLLDTRDDSPVIRLINALLLEAVKEG 121

Query: 125 ASDIHIEPFEKALIVRLRIDGVLTEVLSLSPRIAAMLVSRVKVMAKLDIAEKRVPQDGRI 184
           ASD+H+E  EK ++VR RIDGVL + L     +A +LVSR+KVMAKLDIAEKRVPQDGR+
Sbjct: 122 ASDVHVETQEKRVVVRFRIDGVLRDKLEPRRELAPLLVSRIKVMAKLDIAEKRVPQDGRV 181

Query: 185 SLALGGKSLDVRVSTLPARMGERVVMRILDKDQAGLRLSDLGMSPDVLSALETAVREPHG 244
           +L +GG  +D RVSTLP + GERVVMR+L+K    L L  LGMS          +  PHG
Sbjct: 182 TLRIGGHDVDARVSTLPTQHGERVVMRLLEKGSLKLDLEHLGMSARDREVFARLLERPHG 241

Query: 245 IILVTGPTGSGKTTTLYAALAVLNDNSRNILTIEDPVEYAVHGIGQTQVNTKVGMTFAAG 304
           ++LVTGPTGSGKTT+LYAAL  LND  RNI+T+EDP+EY + GIGQTQVN++ GMTFA G
Sbjct: 242 MLLVTGPTGSGKTTSLYAALQRLNDRKRNIMTVEDPIEYELAGIGQTQVNSRTGMTFARG 301

Query: 305 LRAILRQDPDVVMVGEIRDSETAQIAVQASLTGHLVLSTVHTNDAAGAVVRLRDMGVEPF 364
           LRAILRQDPDV+MVGEIRD ETA++AV++++TGH VLST+HTN A G+V RL DMGVE +
Sbjct: 302 LRAILRQDPDVIMVGEIRDHETAEVAVRSAMTGHFVLSTLHTNSAVGSVTRLIDMGVERY 361

Query: 365 LLASTLRLVIAQRLVRRLCEHCRTPEPADAATAALVG--LPEGEILYRPVGCAHCGHTGY 422
           LLA  L  + AQRLVRRLC  CR  + A  + + L+G  +  GE ++R VGC  CG  GY
Sbjct: 362 LLAPMLVGLAAQRLVRRLCPSCRREDVASESDSMLLGGAIKAGEPVWRAVGCEDCGGDGY 421

Query: 423 QGRIGVYEALRVDDHLRRLIGGNASEQEITEAG--LDRRLGQEARNYVLAGLTTVEEALR 480
           +GR G+YE + VD+  + +I   ASE EI          L  +      AG+TTVEE  R
Sbjct: 422 RGRAGLYEVVPVDERFQAMIHDGASEAEIEAHARKTSPALLDDGVAKAKAGVTTVEEVAR 481

Query: 481 ITGQGA 486
           +  + A
Sbjct: 482 VVREEA 487