Pairwise Alignments

Query, 387 a.a., DNA replication and repair protein recF from Caulobacter crescentus NA1000

Subject, 362 a.a., DNA replication/repair protein RecF from Rahnella sp. WP5

 Score = 90.9 bits (224), Expect = 5e-23
 Identities = 107/382 (28%), Positives = 160/382 (41%), Gaps = 38/382 (9%)

Query: 5   ALLSLTLADFRSYERARLETGGRSVYLFGANGAGKTNLLEAISLLSPGKGLRGVSLAEVG 64
           AL  L + DFR+ E A L+      +L G NG+GKT++LEA+  L  G+  R +    V 
Sbjct: 2   ALTRLLIKDFRNIEAADLDPSPGFNFLVGPNGSGKTSVLEAVYTLGHGRAFRSLQAGRVI 61

Query: 65  RRLPGEAVGRAWAVAAEVQSGEDAPVRIGTGVEQGGAARRTVRLEG-ETVPPGRLADHVR 123
           R    E V     + A V  G D  + IG    + G ++  VR++G +      LA  + 
Sbjct: 62  RHDQPEFV-----LHARVDDGGDRELSIGLSKSRQGDSK--VRIDGSDGHKVSELAQMLP 114

Query: 124 PIWLTPAQDRLFLEAASERRRFFDRLVFAGEPAHAANANGYDKAQRERMRLLVDAAETGA 183
              +TP    L       RR F D   F  +P      +   +  ++R   L   +    
Sbjct: 115 MQLITPEGFTLLNGGPKYRRAFIDWGCFHHDPGFFIAWSNLRRLLKQRNAALRQVSRYA- 173

Query: 184 PADAAW---LTALEARLAEFGALLAQARARTLLALQAEIDGRGDRPFPLARLGLTGEWER 240
               AW   L  L  R++E+ A  + A A  + A  A+        F   R      W++
Sbjct: 174 -QIRAWDQELIPLAGRISEWRAAYSDAIAADISATCAQFLPEFALSFSFQR-----GWDK 227

Query: 241 MALEGAPFAEIELKLAQALASARARDGAAGRALTGPHRGDLAIFHVEKDRPAAE--CSTG 298
                      E +  + L     RD A     +GPH+ D   F +  D    E   S G
Sbjct: 228 -----------ETEYGELLERNFERDRALTYTASGPHKAD---FRIRADGTPVEDLLSRG 273

Query: 299 EQKALILNLVLAQAARLSRAESAPNPVILLDEVAAHLDLTRRAALADELTALKLQAFLTG 358
           + K L+  L LAQ   L+R +S    + LLD+ A+ LD  RR  LAD L A + Q F++ 
Sbjct: 274 QLKLLMCALRLAQGEFLTR-QSGRRCLYLLDDFASELDTDRRRLLADRLKATQAQVFVSA 332

Query: 359 -TDESLFDHL--KGRALGVRVG 377
            + E + D +  KG+   V  G
Sbjct: 333 ISAEQVTDMMGEKGKMFRVEQG 354