Pairwise Alignments
Query, 369 a.a., conserved membrane spanning protein from Caulobacter crescentus NA1000
Subject, 374 a.a., AI-2E family transporter from Pedobacter sp. GW460-11-11-14-LB5
Score = 86.3 bits (212), Expect = 1e-21 Identities = 73/355 (20%), Positives = 160/355 (45%), Gaps = 26/355 (7%) Query: 9 VTTRNAVVFLAVIAGAATLKWMQDILTPLALALFLAVMIDSFARVLTDRTPRFPRRLALP 68 +T + ++ L ++A A + +DI+ P+ +A F+++M+ R L + R P LA+ Sbjct: 7 LTVKRSIELLGLMAIVAVMVIGRDIIMPMLMAFFISIMLLPVYRFL--KRKRIPESLAII 64 Query: 69 TAVVLS-------LWLFGMSVWIVIDNGKEFFDHSSQYVDSLNAIIARFTPTIARLAPGL 121 +++L +W F + I++ + + + +Q+++SL+ I+R T Sbjct: 65 LSILLVALFVALIVWFFSNQIGILVKDFPQIKSNVTQHINSLSDWISRIT----HYDDKQ 120 Query: 122 ELSVAPTIGDLVKHLNPQRYFGDVAQSFNSFATSAILVLIYLGFILASRRGFARKIVALF 181 + + T D + ++ G A + + L+ IY+ +L + R I F Sbjct: 121 QKAFIQTKSDDLMNMGTS-LAGGAAVTLSGIFVFIGLLPIYIYLMLFYKDILLRFIFMWF 179 Query: 182 PHHAERETNMKMFQRIRDGVEQYLWIQTVTGLMIAASAFMVMT-----LVGLDNAFFWAF 236 + +++ ++ YL GL+I + ++ L+G+ +A Sbjct: 180 KTDDHPKVKEAIYET-ESIIKSYL-----IGLLIQITYMTILLGGILMLIGIKHALLIGV 233 Query: 237 LIFLAAYIPILGGAIGCFLPPIFALIQFPESLWPAVLLFVALQGIFFVVGNVILPRMQGD 296 + + IP +G IG + + L E LWP + + + + F+ N+++PR+ G Sbjct: 234 IFAILNLIPYVGALIGNLIGVLLTLTSSQE-LWPVITVLGVIAFVQFLDNNILMPRIVGS 292 Query: 297 SLNMDPTVVLLSLAVWGALWGVPGMFLSTPLTVAAMVILAQFEGSRWIAILLSED 351 + ++ +L + + G++ GV GMFL+ P+ +I + E + +LL ++ Sbjct: 293 KVKINALFAILGVFIGGSIAGVSGMFLALPIVAVLKIIFDRTESFKQWGVLLGDE 347