Pairwise Alignments

Query, 712 a.a., polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase from Caulobacter crescentus NA1000

Subject, 708 a.a., 3' exoribonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score =  927 bits (2397), Expect = 0.0
 Identities = 479/713 (67%), Positives = 559/713 (78%), Gaps = 10/713 (1%)

Query: 1   MFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPGQDFFPLT 60
           +F++ RK IEWGG+ LVLETGRIARQADGAV+A++G+T VL TAV AK+ K   DFFPLT
Sbjct: 3   LFNVFRKEIEWGGRKLVLETGRIARQADGAVMASLGDTTVLCTAVGAKT-KSKFDFFPLT 61

Query: 61  VNYQEKTFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQH 120
           VNYQEKTFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFV G+KNE Q+V TVL H
Sbjct: 62  VNYQEKTFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVHGYKNETQLVCTVLCH 121

Query: 121 DLENDPDILGMVAASAALCLSGAPFMGPIGAARVGWVDGAYVLNPTLDEMKESKMDLVVA 180
           DLEN+PDI+ +V ASAAL LSG PF+GPIGAARVG +DGA+VLNPT D+M +S +DLVVA
Sbjct: 122 DLENNPDIVAIVGASAALTLSGLPFLGPIGAARVGLIDGAFVLNPTRDQMADSVLDLVVA 181

Query: 181 GTADAVMMVESEIQELSEEIVLGGVNFAHQQMQAVIDAIIDLAEHAAKEPFAFEPE--DT 238
           GT + V+MVESE  ELSE+ +L  V F H+  Q VIDAII LAE  A+EP A EP   + 
Sbjct: 182 GTREGVLMVESEAHELSEQQMLDAVMFGHEGYQPVIDAIIALAEQCAREPRAIEPPAPEA 241

Query: 239 DAIKAKMKDLVGADIAAAYKIQKKQDRYEAVGAAKKKAIAALGLSDENPTGYDPLKL-GA 297
           +A+ AK++++  A +  AYK   K  R++ V A +    AA    D        L L GA
Sbjct: 242 EAVAAKVREVGEAGLRDAYKEADKMVRHDKVDAVRDAVTAAFAGDDA------ALALAGA 295

Query: 298 IFKELEADVVRRGILDTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVAT 357
            FK+LE D+VR  ILDTGLRIDGRD KTVRPI    GILPR HGSALFTRGETQA+V  T
Sbjct: 296 AFKDLEKDIVRGSILDTGLRIDGRDTKTVRPIEIYPGILPRAHGSALFTRGETQALVTTT 355

Query: 358 LGTGDDEQFIDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRALRPML 417
           LGTG DEQ IDALEG Y+E+F+LHYNFPPYSVGE GRMGSPGRREIGHGKLAWRA+ PM+
Sbjct: 356 LGTGQDEQIIDALEGEYRENFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPMM 415

Query: 418 PTKEDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLILEQDGF 477
           P K+ FPYT+R+VSEITESNGSSSMATVCG+SLA+MDAGVPL   V+GIAMGLI E + F
Sbjct: 416 PAKDAFPYTVRVVSEITESNGSSSMATVCGTSLALMDAGVPLKNAVAGIAMGLIKEDERF 475

Query: 478 AVLSDILGDEDHLGDMDFKVAGTSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAHILG 537
           AVLSDILGDEDHLGDMDFKVAGT+ G+TSLQMDIKI  IT  IM  AL QAK+GR HILG
Sbjct: 476 AVLSDILGDEDHLGDMDFKVAGTANGITSLQMDIKITSITKEIMNVALNQAKDGRIHILG 535

Query: 538 EMNKAMDAPRADVGDFAPKIETINIPTDKIREVIGSGGKVIREIVATTGAKVDINDDGVV 597
           EM KA+   R+DV DFAP+I TI +P  K+REVIGSGGKVIREI   TG K+DI DDG +
Sbjct: 536 EMTKALGNARSDVSDFAPRITTIKVPPQKVREVIGSGGKVIREITEVTGTKIDIEDDGTI 595

Query: 598 KVSASDGAKIKAAIDWIKSITDEAEVGKIYDGKVVKVVDFGAFVNFFGAKDGLVHVSQIS 657
           K++++D    + A+DWIK I  E E+G +Y GKVVK++DFGAFVNF G +DGLVH+S++S
Sbjct: 596 KIASADAEATQRAVDWIKGIVAEPEIGVVYTGKVVKIMDFGAFVNFLGTRDGLVHISELS 655

Query: 658 NERVAKPSDVLKEGQMVKVKLLGFDDRGKTKLSMKVVDQETGEDLSKKEAAAE 710
            +RV K  DV+  G  VKVK +GFDDRGK KLSMK VDQ TG DLS +  A E
Sbjct: 656 QDRVKKVGDVVNVGDQVKVKCVGFDDRGKIKLSMKQVDQVTGADLSTQAPAEE 708