Pairwise Alignments

Query, 712 a.a., polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase from Caulobacter crescentus NA1000

Subject, 756 a.a., polynucleotide phosphorylase/polyadenylase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  640 bits (1651), Expect = 0.0
 Identities = 343/714 (48%), Positives = 480/714 (67%), Gaps = 11/714 (1%)

Query: 1   MFDIKRKTIEWGGKTLVLETGRIARQADGAVLATMGETVVLATAVFAKSQKPGQDFFPLT 60
           +F+  R +   GGK ++LETGR+A QA GAV    G TVVL TA     ++    FFPLT
Sbjct: 4   VFNATRVSAVVGGKEIILETGRLANQAHGAVWVQCGGTVVLVTACTQPLERD-MGFFPLT 62

Query: 61  VNYQEKTFAAGKIPGGFFKRE-GRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQ 119
           V+Y EK +AAG+IPG FF+RE GRPSE+ETLVSRLIDRP+RPLF KGF++EVQ++  V+ 
Sbjct: 63  VDYSEKMYAAGRIPGSFFRREIGRPSERETLVSRLIDRPVRPLFTKGFRDEVQILANVIS 122

Query: 120 HDLENDPDILGMVAASAALCLSGAPFMGPIGAARVGWVDGAYVLNPTLDEMKESKMDLVV 179
            D END D+L +  ASAAL +S  PF GP+  AR+G V+G +VLNPT+ EM+ S + +V+
Sbjct: 123 ADQENDSDVLAVTGASAALSISPIPFEGPVAGARIGRVNGEFVLNPTMKEMEASDLAIVI 182

Query: 180 AGTADAVMMVESEIQELSEEIVLGGVNFAHQQMQAVIDAIIDLAEHAAKEPFAFEPEDTD 239
           A + D+V+MVE E   + E++++  + +AH+++Q +IDA + L E   K   A  P   +
Sbjct: 183 AASRDSVVMVEGEAHFVPEDVIVAALEWAHKEIQPLIDAQLKLMELVGKAKMAVTPPVEN 242

Query: 240 A-IKAKMKDLVGADIAAAYKIQKKQDRYEAVGAAKKKAIAAL----GLSDENPTGYDPLK 294
           A +KA++ +L   ++ AA +I +K  R +A  A K+K + AL     L++    G +   
Sbjct: 243 AELKARVAELATTELDAALRIPEKMARKDARKAVKEKVLEALLADPALAENANLGRE--- 299

Query: 295 LGAIFKELEADVVRRGILDTGLRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIV 354
           +G +   LE  +VRR IL  G RIDGRD KTVRPIL E G+LPR HGSALF+RGET+++V
Sbjct: 300 VGDMLGSLEKVLVRRRILKEGTRIDGRDTKTVRPILIEAGLLPRAHGSALFSRGETKSLV 359

Query: 355 VATLGTGDDEQFIDALEGTYKESFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRALR 414
           VATLG+  D Q +D+L G   + F+LHYNFPPYSVGE  +M    RREIGHG LA +AL+
Sbjct: 360 VATLGSSTDSQRMDSLVGDVTKKFMLHYNFPPYSVGEV-KMSRVSRREIGHGALAEKALK 418

Query: 415 PMLPTKEDFPYTIRLVSEITESNGSSSMATVCGSSLAMMDAGVPLVRPVSGIAMGLILEQ 474
           P+LP  + FP+T+R+V+E  ESNGSSSMA VCG SL++MDAGVP+  PV+G+AMGLI E+
Sbjct: 419 PVLPQDDSFPFTLRVVAETMESNGSSSMAAVCGGSLSLMDAGVPVTAPVAGVAMGLIKEE 478

Query: 475 DGFAVLSDILGDEDHLGDMDFKVAGTSEGLTSLQMDIKIAGITPAIMEQALAQAKEGRAH 534
             + VL+DILGDED LGDMDFK+AGT+EG+T++QMDIKI G+   +M +A+AQA+E R H
Sbjct: 479 GEYLVLTDILGDEDALGDMDFKIAGTAEGITAVQMDIKITGLPTDVMARAMAQAREARLH 538

Query: 535 ILGEMNKAMDAPRADVGDFAPKIETINIPTDKIREVIGSGGKVIREIVATTGAKVDINDD 594
           IL EM K ++APR ++  +AP+   + +  D IR +IG GGK I+ I A TGA +DI D 
Sbjct: 539 ILAEMAKVLEAPRTELSKYAPQHAEVFVNPDVIRIIIGPGGKNIKAITAATGASIDIEDS 598

Query: 595 GVVKVSASDGAKIKAAIDWIKSITDEAEVGKIYDGKVVKVVDFGAFVNFFGAKDGLVHVS 654
           G V + A     ++ A + ++     AE+GK Y GKV KV++ GA V      + LVH+S
Sbjct: 599 GKVSIFAPTYEAMEMAREMVQYYDQRAELGKNYVGKVRKVLEIGAIVEILPNLEALVHIS 658

Query: 655 QISNERVAKPSDVLKEGQMVKVKLLGFDDRGKTKLSMKVVDQETGEDLSKKEAA 708
           Q+   RV +  DV + G+ + VK++  +          V+ +E G + + ++ A
Sbjct: 659 QLDTNRVEQAGDVARLGEDMTVKVIEINGDRIRASRKAVLLEEQGVEWNPEDTA 712