Pairwise Alignments

Query, 211 a.a., RNA polymerase sigma factor from Ralstonia sp. UNC404CL21Col

Subject, 257 a.a., Alternative RNA polymerase sigma factor SigE from Mycobacterium tuberculosis H37Rv

 Score = 76.3 bits (186), Expect = 5e-19
 Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 8/178 (4%)

Query: 20  QAVLPHVDAAYNLARWLSGDAQDADDIVQEACLRAFRLFGGFRGGDGRPWLLAIVRNTWF 79
           + V  H D  Y LA  LSG+  DA+D+ QE  +R FR    ++ G    WL  I  N + 
Sbjct: 86  ELVRQHADRVYRLAYRLSGNQHDAEDLTQETFIRVFRSVQNYQPGTFEGWLHRITTNLFL 145

Query: 80  SECARRKQAPAQPWDDDAAAGQAHDDSASYGIDPAALLARIDDVRRVHVALAQLPVPYRE 139
               RR +   +   +D     A + +       A L   +        ALA LP  +R 
Sbjct: 146 DMVRRRARIRMEALPEDYDRVPADEPNPEQIYHDARLGPDL------QAALASLPPEFRA 199

Query: 140 VLVLRELEDLPYRDIAAVVDAPIGTVMSRLARARQQLARLLT--EDTAPPRTNVTPIR 195
            +VL ++E L Y +I A +   +GTV SR+ R RQ L   L    +      +V P+R
Sbjct: 200 AVVLCDIEGLSYEEIGATLGVKLGTVRSRIHRGRQALRDYLAAHPEHGECAVHVNPVR 257