Pairwise Alignments

Query, 558 a.a., methyl-accepting chemotaxis protein from Ralstonia sp. UNC404CL21Col

Subject, 698 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  170 bits (430), Expect = 2e-46
 Identities = 115/395 (29%), Positives = 197/395 (49%), Gaps = 14/395 (3%)

Query: 169 PVWEEATALADKLVADNRAVADESARQIRASVQSTEITLAVALGVVLLAALVLGYALFKA 228
           P++ +       LV + +A A     + +A  ++    +A+A    L  A+V G+ L +A
Sbjct: 309 PIYGQVQQAGKALVDELKASARADFERAQARYENILWAMALATLAALALAVVGGWLLVRA 368

Query: 229 ITVPMARVVDAHDDMRTGNLSGRLDLRRNDEFGTLEEGFNRMAEELASLVSQAQKSSLQV 288
           I  PM + +D    +  G+L+  +D+ R DE G L      M   L +++ Q Q++S Q+
Sbjct: 369 IVNPMRQAIDTFKLIAEGDLTSDIDISRRDEAGQLLCQLATMQATLKAMLDQIQEASRQM 428

Query: 289 T-------TSVAEIAATSKEQQATAAETAATTTEIGATSREIFATSRDLLRTMNEVSSVA 341
                   + VA +AA S++Q       AA T E   + +E+   +        E +S A
Sbjct: 429 DQRCSQLESEVALVAAKSQQQLDDVQSIAAATEEFSQSVQEVAGHA-------GETASAA 481

Query: 342 EQSATLAGASQSGLTRMEDTMRGVMEAAGSVNAKLAILNEKATNINQVVSTITKVADQTN 401
           + S  L   S + + R       V+EA    +A L  LN     I Q+   I ++ADQTN
Sbjct: 482 QNSERLVEESNTQIGRSMAVTNRVVEAVTGSSATLHELNTAIDQIGQITQVIKEIADQTN 541

Query: 402 LLSLNAAIEAEKAGEYGRGFAVVATEIRRLADQTAVATYDIEQTVKEIQSAVSAGVMGMD 461
           LL+LNAAIEA +AGE GRGFAVVA E+R+LA++T  +T DI   +  IQ A    V  M+
Sbjct: 542 LLALNAAIEAARAGEAGRGFAVVADEVRKLAERTTTSTADITGNIGAIQGATHEAVNRME 601

Query: 462 KFSEEVRRGMRDVQQVGTQLSQIITEVQTLAPRFQMVNEGMQTQATGAEQITQALSQLSE 521
           +   EV  G+  +++    L  I    Q ++   + ++E  Q Q+  ++++  ++  +S 
Sbjct: 602 QAVREVEEGIGMMRESVAGLEGITAASQQVSAMARQISEASQQQSIASQEVNGSMEHISV 661

Query: 522 AAQQTAESLRQSSQAIDDLTLVANQLRTGVSRFKI 556
             +Q   + +++ +A + L   A  LR  ++ F++
Sbjct: 662 LIEQNTATAQEAQRATEALVSTAEDLRAILASFRL 696



 Score = 25.4 bits (54), Expect = 0.008
 Identities = 38/195 (19%), Positives = 78/195 (40%), Gaps = 17/195 (8%)

Query: 372 VNAKLAILNEK--ATNINQVVSTITKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEIR 429
           +NA+L  L +   +    Q+V  + +   + +   +NAA +A KAG++ +   ++ T+I 
Sbjct: 249 INAQLEALQKLPLSEKERQLVEQLGEARKKFSAEGVNAARDALKAGDFHQASVLLLTKIN 308

Query: 430 RLADQTAVATYDIEQTVKEIQSAVSAGVMGMDKFSEEVRRGMRDVQQVGTQLS------- 482
            +  Q   A    +  V E++++  A         E +   M         L+       
Sbjct: 309 PIYGQVQQAG---KALVDELKASARADFERAQARYENILWAMALATLAALALAVVGGWLL 365

Query: 483 --QIITEVQTLAPRFQMVNEGMQT---QATGAEQITQALSQLSEAAQQTAESLRQSSQAI 537
              I+  ++     F+++ EG  T     +  ++  Q L QL+         L Q  +A 
Sbjct: 366 VRAIVNPMRQAIDTFKLIAEGDLTSDIDISRRDEAGQLLCQLATMQATLKAMLDQIQEAS 425

Query: 538 DDLTLVANQLRTGVS 552
             +    +QL + V+
Sbjct: 426 RQMDQRCSQLESEVA 440