Pairwise Alignments

Query, 558 a.a., methyl-accepting chemotaxis protein from Ralstonia sp. UNC404CL21Col

Subject, 581 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  170 bits (431), Expect = 1e-46
 Identities = 143/547 (26%), Positives = 261/547 (47%), Gaps = 58/547 (10%)

Query: 27  RIVFSFGMLFVLMVIMAVVSYNRLRAIDQEALSLERDSVPGLYLSTSLRATTRNSHAMLE 86
           R+   F  +  L+ +++V ++ ++  I++    +  D    +  +  LR    N      
Sbjct: 13  RLAAVFAFIVALLAVVSVTAFIKINNINRAIDQIVNDRYLKVRWAFDLRDGV-NEQIKYL 71

Query: 87  RALFVDADPELANR----DLERAAQLVRD-LDKHSADYESTIYR------DDDRQRFRVY 135
           R + +D +   AN      LE A +  ++ LDK +A   + + +      D+ R  F   
Sbjct: 72  RGIAIDIENRPANEKRFAQLEVAVKQTKEALDKITARQVTAVGQKKAKALDEARIAFDAS 131

Query: 136 RAVVDKYLPMFNEAMQLARTSKPAAQAVARRAVPVWEEATALADKLVADNR--AVADESA 193
           +A    +L     A+  A  S  A + V R+         ALA +  AD++   +  E A
Sbjct: 132 KA---DFL-----ALVKAGNSTSADEYVLRKITDTQNNYLALA-RAFADSQDAQLQAEGA 182

Query: 194 RQIRASVQSTEITLAVALGVVLLAALVLGYALFKAITVPMARVVDAHDDMRTGNLSGRLD 253
           + +     + E+TLA ++  VL AA++LGY + ++I  P+   V   +++  G+L+ R++
Sbjct: 183 KAVADGAMAIEVTLACSMAAVL-AAIILGYLMARSIVKPLTEAVRVAENVAAGDLTTRIE 241

Query: 254 LRRNDEFGTLEEGFNRMAEELASLVSQAQKSSLQVTTSVAEIAATSKEQQATAAETAATT 313
               DE G L +   +M + L  +VS  ++ +  +TT+  EIA+ + +  A   + A + 
Sbjct: 242 PHSRDETGQLMQALRKMNDNLIEIVSGVRRGTESITTASGEIASGNLDLSARTEQQAGSL 301

Query: 314 TEIGATSREIFATSR---DLLRTMNEVSSVAEQSATLAGASQSGLTRMEDTMRGVMEAAG 370
            E  +   E+ +T R   D  R  N+++  A + A   G                 +  G
Sbjct: 302 EETASAMEEMTSTVRQNADNARQANQMAVSASEIALQGG-----------------QIVG 344

Query: 371 SVNAKLAILNEKATNINQVVSTITKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEIRR 430
            V   +  +N+ +  I  ++  I  +A QTN+L+LNAA+EA +AGE GRGFAVVATE+R 
Sbjct: 345 RVVHTMDEINQSSRKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRS 404

Query: 431 LADQTAVATYDIEQTVKEIQSAVSAGVMGMDKFSEEVRRGMRDVQQVGTQLSQIITEVQT 490
           LA ++A A        KEI++ ++  V        +V  G   V Q G  + Q+++ V++
Sbjct: 405 LAQRSAAA-------AKEIKALIADSV-------GKVEGGSALVAQAGATMEQVVSSVRS 450

Query: 491 LAPRFQMVNEGMQTQATGAEQITQALSQLSEAAQQTAESLRQSSQAIDDLTLVANQLRTG 550
           +      ++     Q++G E+I +A++Q+ E  QQ A  + Q++ A   +   A +L   
Sbjct: 451 VTDIVAEISAASAEQSSGIEEINRAVTQMDEGTQQNAALVEQAAAAAKSMQEQAVRLTQS 510

Query: 551 VSRFKIE 557
           +S FK+E
Sbjct: 511 ISIFKLE 517