Pairwise Alignments

Query, 558 a.a., methyl-accepting chemotaxis protein from Ralstonia sp. UNC404CL21Col

Subject, 585 a.a., methyl-accepting chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  172 bits (435), Expect = 4e-47
 Identities = 137/541 (25%), Positives = 248/541 (45%), Gaps = 36/541 (6%)

Query: 24  LGNRIVFSFGMLFVLMVIMAVVSYN---RLRAIDQEALSLERDSVPGLYLSTSLRATTRN 80
           +G R+   FG++  ++VI+  V+Y    RL A ++  +           ++ SL      
Sbjct: 8   IGTRLYMGFGLVAAILVILVSVAYTNFARLGAANELNVHTYEVRAQLRAMAESLINIETG 67

Query: 81  SHAMLERALFVDADP-ELANRDLERAAQLVRDLDKHSADYESTIYRDDDRQRFRVYRAVV 139
                   +    +P  L     + A +  R L   +   +  +    D ++ R  ++ +
Sbjct: 68  QRGFSLSGIDASLEPYHLGMTTFKTALEKTRTLTSDNTLQQQRLQELSDSEQ-RWLKSAI 126

Query: 140 DKYLPMFNEAMQLARTSKPAAQAV--ARRAVPVWEEATALADKLVADNRAVADESARQIR 197
           D  + +   A++  R    A  A   A +     +    L D L     A+  E A +  
Sbjct: 127 DPAIEL-RRAVREGREQMAAVVAFEQAGKGKSQMDSMRVLLDDLDRTESALLGERAEEAA 185

Query: 198 ASVQSTEITLAVALGVVLLAALVLGYALFKAITVPMARVVDAHDDMRTGNLSGRLDLRRN 257
           A    T  TL     + L+ A++L + L   IT P+A  V     + +G+L+ R+++R  
Sbjct: 186 ALRSVTSTTLIGGGAIALMLAVLLAWWLANNITRPLALAVQLARRVASGDLTARIEVRSR 245

Query: 258 DEFGTLEEGFNRMAEELASLVSQAQKSSLQVTTSVAEIAATSKEQQATAAETAATTTEIG 317
           DE G L      M E L  +VS  ++ +  + T+ +EIA  + +  +   + A++  E  
Sbjct: 246 DETGALLGALKDMNESLVRIVSGVRRGTEMIATASSEIATGNLDLSSRTEQQASSLEETA 305

Query: 318 ATSREIFATSRDLLRTMNEVSSVAEQSATLAGASQSGLTRMEDTMRGVMEAAGSVNAKLA 377
           ++  E+ +T +       E + +A+ ++ +A +    + R+ DTM  +            
Sbjct: 306 SSMEELTSTVQQNTANAREANRMAQAASDIASSGGGVVARVVDTMEEI------------ 353

Query: 378 ILNEKATNINQVVSTITKVADQTNLLSLNAAIEAEKAGEYGRGFAVVATEIRRLADQTAV 437
             N+ +  I  ++S I  +A QTN+L+LNAA+EA +AGE GRGFAVVA+E+R LA ++A 
Sbjct: 354 --NDSSRKIVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAA 411

Query: 438 ATYDIEQTVKEIQSAVSAGVMGMDKFSEEVRRGMRDVQQVGTQLSQIITEVQTLAPRFQM 497
           A        KEI++ +S  V        +V  G   V + G  + +I+  VQ +      
Sbjct: 412 A-------AKEIKALISDSV-------AKVESGSLLVNEAGDTMREIVESVQRVTNMINE 457

Query: 498 VNEGMQTQATGAEQITQALSQLSEAAQQTAESLRQSSQAIDDLTLVANQLRTGVSRFKIE 557
           ++   + Q +G EQ++QA+ Q+ +  QQ A  + Q++ A   L   A +L   VS F++E
Sbjct: 458 ISAAGEEQRSGIEQVSQAVGQMDQVTQQNAALVEQAAAASQSLQEQAQELAQAVSVFRLE 517

Query: 558 A 558
           A
Sbjct: 518 A 518