Pairwise Alignments

Query, 304 a.a., ABC transporter permease from Ralstonia sp. UNC404CL21Col

Subject, 315 a.a., DNA-directed RNA polymerase subunit alpha from Burkholderia phytofirmans PsJN

 Score =  305 bits (780), Expect = 1e-87
 Identities = 160/286 (55%), Positives = 206/286 (72%), Gaps = 10/286 (3%)

Query: 16  PAP----PAPRHPIRRLLSGFGVTGLIGLAVLVFWLLAATVGPALLP--AHLITSGDGNG 69
           PAP    P  +   +RL+  F V GLIGL ++ FWLL A +GP + P     +TS +   
Sbjct: 29  PAPVEVAPLKQGVFKRLVHRFSVLGLIGLLMVAFWLLVAFIGPLVAPYKGGALTSTE--- 85

Query: 70  DVFGPMSAAHWFGTDYLGRDMFVRVVEGARYTVGVALVATVMASGTGTVLALFAAAMGGL 129
            +FG  SAA+  GTDYLGRDM  R++ GARYTVG+AL A V+AS  GT   L AA  G +
Sbjct: 86  -IFGRYSAAYPLGTDYLGRDMLSRILYGARYTVGLALAAAVLASVIGTFFGLLAAVSGRV 144

Query: 130 VDATLSRVLDTLTAIPSKMFALLMVAGFGSSVTMLVVTAAIIYVPGAYRIARSLAVNINA 189
           VD  LSR+ D L +IPSK+ AL+++A FGSS+ ML   AA  Y+PGA+RI+RSLAVN+ +
Sbjct: 145 VDEILSRLFDALISIPSKVLALVVIAAFGSSIPMLTTVAAAAYIPGAFRISRSLAVNVMS 204

Query: 190 LDYVTVARTRGEGTLYIMLREILPNILGPMLADLGLRFVYVVLLLASLSFLGLGIQPPSA 249
           L+YV VAR RGEG  YI   E+LPN++ PMLAD GLRFV++VLLL+ LSFLGLG+QPP+A
Sbjct: 205 LEYVQVARARGEGIFYIARVEVLPNMIHPMLADFGLRFVFIVLLLSGLSFLGLGVQPPNA 264

Query: 250 DWGSLVRENIGALPDAGASVIVPALAIASLTIAVNIVIDNLPGRGR 295
           DWGSLVRENIG L +   +V++PA+AIA+LTI +N++IDNL  R R
Sbjct: 265 DWGSLVRENIGGLSEGAPAVLMPAIAIATLTIGMNLLIDNLRRRSR 310