Pairwise Alignments

Query, 330 a.a., TRAP transporter substrate-binding protein from Ralstonia sp. UNC404CL21Col

Subject, 323 a.a., tripartite ATP-independent periplasmic transporter solute receptor, DctP family from Pseudomonas stutzeri RCH2

 Score =  224 bits (572), Expect = 2e-63
 Identities = 124/322 (38%), Positives = 195/322 (60%), Gaps = 8/322 (2%)

Query: 12  LLFAALLAAFA-SGAAQARTFRVADVHGDTYPTNMAVKFMGDEIKKATDGKDSVKVFGNS 70
           LL  AL  AF  SG A A T ++A++H   YPT +A++ +G +++ AT+G+   ++F   
Sbjct: 7   LLVTALPFAFCISGLAHAMTLKIAEIHPAGYPTVVAMENLGKKLETATNGEIKSRMFAGG 66

Query: 71  ALGSEKDTIDQVRIGAIDMVRANGAAFNEIVPESVIPSLPFLFRDIEHFRKVMYGPVGQK 130
            LGSEK+ I+Q +IGA+ + R +  +   +VP + + ++PF+FRDI+H RKV+ G +GQ+
Sbjct: 67  VLGSEKEVIEQTQIGAVQLTRVSLGSVGPVVPATNVFNMPFVFRDIDHMRKVVDGEIGQE 126

Query: 131 ILDAFSAKGF--VALTFYESGARSIYAKKAIHTPADMKGVKIRVQPSDLMVDEIKAMGGT 188
           ILDA +   F  V L + E+G+RS+Y KK I    D+KG+KIRV  + L +D + AMG  
Sbjct: 127 ILDAITNSDFNMVGLAWMEAGSRSLYTKKPIRRIEDLKGMKIRVIGNPLFIDTLNAMGAN 186

Query: 189 PTPMPFSEVYTGLKTGLVDAAENNIPSYEETKHFEVAQIYSETQHAMTPEVLVFSKKIWD 248
              M   E+++ L++G++D AENN P+  E  HF VA+ Y++T H + PE L+ SK  W+
Sbjct: 187 GIAMDTGEIFSALQSGVIDGAENNSPTLLEHNHFRVAKHYTQTHHLILPEPLLMSKDTWN 246

Query: 249 TLTPQEQAAIRKAAADSVPYYVKLWTAREQAATATVTKGNATIVPASQVDRAAFVKAMQP 308
            L+P++QA ++K A ++      LW A+E   TA+  K  A  V   +VD   F  A  P
Sbjct: 247 KLSPEQQATVKKLAKEAQLEERDLWVAKE---TASNEKLKAEGVEFIEVDTKPFYDATAP 303

Query: 309 LWTKYETTPQMKDIVNAIVATK 330
           +  KY    Q  +++  I A +
Sbjct: 304 VREKYGA--QFAELIKRIEAVQ 323