Pairwise Alignments

Query, 330 a.a., TRAP transporter substrate-binding protein from Ralstonia sp. UNC404CL21Col

Subject, 333 a.a., TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, substrate-binding component (from data) from Phaeobacter inhibens DSM 17395

 Score =  128 bits (322), Expect = 2e-34
 Identities = 83/299 (27%), Positives = 149/299 (49%), Gaps = 16/299 (5%)

Query: 39  DTYPTNMAVKFMGDEIKKATDGKDSVKVFGNSALGSEKDTIDQVRIGAIDMVRANGAAFN 98
           D +P  +A   +   I +  +G   ++V+ NS L ++   ++ +  G + +   + + F 
Sbjct: 40  DKHPKGIAASLLEKRINEEMNGTMCLEVYPNSTLYNDNKVLEAMLQGDVQLAAPSLSKFE 99

Query: 99  EIVPESVIPSLPFLFRDIEHFRKVMYGPVGQKILDAFSAKGFVALTFYESGARSIYAKKA 158
           +   +  +  LPF+F++I+          GQ +LD+   +G   L+++ +G + + A K 
Sbjct: 100 KFTKQFRLFDLPFMFKNIDAVDAFQGSENGQAMLDSMQRRGLQGLSYWHNGMKQMSANKP 159

Query: 159 IHTPADMKGVKIRVQPSDLMVDEIKAMGGTPTPMPFSEVYTGLKTGLVDAAENNIPSYEE 218
           +  P+D  G+K RVQ SD++V +++A+GG+P  M FSEVY  L+ G+VD  EN   +   
Sbjct: 160 LINPSDANGLKFRVQSSDVLVAQMEAIGGSPQKMAFSEVYGALQQGVVDGQENTWSNIYG 219

Query: 219 TKHFEVAQIYSETQHAMTPEVLVFSKKIWDTLTPQEQAAIRKAAADSVPYYVKLWTAREQ 278
            K FEV    +ET H     ++V S    D+L P    A+R+     +    ++   R  
Sbjct: 220 KKFFEVQDGVTETNHGALDYLVVTSVDWLDSLDP----AVRE---QFLTILGEVTATRNS 272

Query: 279 AATATVTKGNATIVPASQV-------DRAAFVKAMQPLWTKY--ETTPQMKDIVNAIVA 328
            +T    +   +I+ A  V        RAA+V+AM+P+W ++  +    M D   AI A
Sbjct: 273 ESTKVNAEARQSIIDAGGVVRELTPEQRAAWVEAMKPVWEQFAGDVGQDMIDAAQAINA 331