Pairwise Alignments

Query, 326 a.a., tyrosine-type recombinase/integrase from Ralstonia sp. UNC404CL21Col

Subject, 360 a.a., Site-specific recombinase XerD from Paraburkholderia bryophila 376MFSha3.1

 Score =  186 bits (472), Expect = 7e-52
 Identities = 122/323 (37%), Positives = 163/323 (50%), Gaps = 16/323 (4%)

Query: 10  PVPDLFQPSLQDWSEQPAQAFEHWLAARGYRESSATVYRAMWRKWLRWAQSHQRALADWS 69
           P  DLF    +DW   P  AF+ WLA + +R SSA VY+A W  +L W  + Q+ L    
Sbjct: 15  PSTDLFDQQREDWRRDPQIAFDAWLAKQHFRRSSAQVYQAQWGLFLEWLSTRQKTLVTVD 74

Query: 70  AADIAAFLDESGLTKLHRYRYARLIERVFHQIEQQRTGTHNPASTAVQQKLAEG----EN 125
              IA F+    + K  R RY RLIERV   + +    + NPA    Q   A      EN
Sbjct: 75  TQSIANFVAGLDIRKPQRVRYLRLIERVLDHVREVEASSANPARFIAQDGEAAWRNAREN 134

Query: 126 DPTTFLSAAERAAIEASLEVGAQASEAAANASAFKLARDRALVAVCHGAGLKVAQVQSLL 185
           +PT FL  AERAA+ A L    Q     + A  +K  RDRAL+AV  G GLK  +  +L 
Sbjct: 135 EPTGFLHHAERAALIAHLFSPLQG---LSKAQRWKERRDRALIAVFLGGGLKTGEAAALA 191

Query: 186 LRQVDEALETITVERPRGPSYR-----APVLQAVRPALAAWLAVRAHAEVPGERVFVADA 240
           +         +T++ P  P+       AP   A+   L AWLA R  A++ G+ +F A  
Sbjct: 192 VSCAAPGSPWLTID-PANPALMRRTRLAPFASAI---LEAWLAERRLADLAGDLIFPASP 247

Query: 241 SGRVMHAASVYRRVEAWLAALPALLHRSERLSPQTLRNGYTAALFDAGADPAEVGYALGL 300
           SGR MH A++ R V+A + A      R+ R SPQTLRN + A LF++G +   VG  LG 
Sbjct: 248 SGRPMHKATMLRAVDALVEAAGIAASRTSRASPQTLRNTFAADLFESGVEAELVGQWLGF 307

Query: 301 RDATSAWRLRAAYAEWQAAAHPD 323
             A SA RL  A+  W    +PD
Sbjct: 308 VQAVSANRLYRAWQTWTKQQNPD 330