Pairwise Alignments

Query, 542 a.a., type VI secretion system tip protein TssI/VgrG from Ralstonia sp. UNC404CL21Col

Subject, 824 a.a., type IV secretion protein Rhs from Herbaspirillum seropedicae SmR1

 Score =  248 bits (633), Expect = 6e-70
 Identities = 168/478 (35%), Positives = 242/478 (50%), Gaps = 23/478 (4%)

Query: 13  ANHDKDDLNREFLVVSTELE-----LEDVAVQSGSIQRYAC-HVRFEAHPTDEVFRPPLT 66
           A+HD D  + E L++S E       L+D         R  C   R    P    +  P  
Sbjct: 331 ASHDHDR-DPELLIISVEHSATNNYLQDSETPPFYANRVRCVRKRIPWRPGRSYYSQPTA 389

Query: 67  TAKPRVKGIQRAVVTGPENQEVWTNDFGCVKVQFEWDRYGQYDQNSSPWIRVANGWSGDQ 126
                + GIQ A V GP  + +  +++G VKVQF WD+ G+ D+ SS W+RVA+ WSG +
Sbjct: 390 -----LLGIQTATVVGPAGENLHVDEYGRVKVQFHWDQIGRNDERSSAWLRVASSWSGGE 444

Query: 127 FGAMHIPRIGQEVLVDYLNGDPNTPIIIGRVPNQLNLPPWQLPGQHALSGIASKELF--- 183
            G + +PRIGQ V+V +L G P+ PII G V NQLN+PPW LP Q ALSG+ S+EL    
Sbjct: 445 QGLVSVPRIGQLVIVQWLGGHPDRPIITGSVVNQLNMPPWTLPSQSALSGMRSRELAPRT 504

Query: 184 ----GKRRNHLLMDDTQGQIQAQLSSDHQTSQLNLGYLTGVPGNPGRKDQRGEGFDLRTD 239
               G R  H+L DDT   IQ Q+ SD   SQL LG++T +  + GR+D RGEGF+LRTD
Sbjct: 505 GNAPGGRSGHVLFDDTHEAIQTQVRSDAFDSQLALGHITRIERHAGRQDARGEGFELRTD 564

Query: 240 GQGAIRGAKGLLLTTEGQIAAVGGHLDRQEFIRCMEAALEAAKSLGEYSSQHEALKTDAG 299
             G +R A+GLLLT+E +  A     D  E +  +  A    +SL + + +HEA   +A 
Sbjct: 565 AHGVVRAAQGLLLTSEPRPKAHRHTTDIGETVARLTQARGTVESLSKLAQEHEAQDKNAD 624

Query: 300 PQSTLTKAIEEWDAGANNHQDKPGRG---GQPLLGAYAPAGIGLATPKSLTSYAGQHIDT 356
                     + DA   +   K GR     +P L   +P+GI  ++  S    + +H   
Sbjct: 625 QYDAAQAIKAQNDAIKGDGAAKGGRFPELTEPHLVLSSPSGIEASSGASTHLASAEHAAL 684

Query: 357 VSKLNQQQTAGQQYLVNAGTGISLFAHSGEWKGIAHQGQLVLQAQQKSITSNAKQDVVVT 416
            +  +    AG+ +  +A   +SL A+    K IA  G++ +QAQ   +   A++ V + 
Sbjct: 685 TAGSHISLAAGKSFFASAAEKLSLLAYRLGAKLIAASGRVEIQAQNDGMELLAQKVVDII 744

Query: 417 ATDGTIVLNAKTGITLMSGNAGIRIAGGKVEAFGPTLIHLHTGNFDVPPAQGIDGALP 474
           +T   I L AK GI L  G + + IA G +  F     H+H  +      QG     P
Sbjct: 745 STRDWINLKAKKGIRLNGGGSELVIAEG-ITGFTQGAHHVHAADHQTLGPQGRPAEFP 801