Pairwise Alignments

Query, 542 a.a., type VI secretion system tip protein TssI/VgrG from Ralstonia sp. UNC404CL21Col

Subject, 870 a.a., type VI secretion protein from Herbaspirillum seropedicae SmR1

 Score =  237 bits (605), Expect = 1e-66
 Identities = 160/499 (32%), Positives = 247/499 (49%), Gaps = 15/499 (3%)

Query: 41  GSIQRYACHVRFEAHPTDEVFRPPLTTAKPRVKGIQRAVVTGPENQEVWTNDFGCVKVQF 100
           G+ +   C  RFE       +R P    KP V   Q AVV GP+ +EV+T+    VKVQF
Sbjct: 376 GNARTGHCFNRFEVQRRKLPYRSPFDHTKP-VMHPQTAVVVGPQGEEVFTDKLNRVKVQF 434

Query: 101 EWDRYGQYDQNSSPWIRVANGWSGDQFGAMHIPRIGQEVLVDYLNGDPNTPIIIGRVPNQ 160
            WDR    D+ +S W+RV+   +G+ +G + +PR+GQE+++ +LNGDP+ P+  GR+ NQ
Sbjct: 435 RWDRINPGDEKASCWVRVSYPNAGENWGEVKVPRVGQELIISFLNGDPDRPVATGRLFNQ 494

Query: 161 LNLPPWQLPGQHALSGIASKELFGKRRNHLLMDDTQGQIQAQLSSDHQTSQLNLGYLTGV 220
              P W   G+  LSG+ SKE  G   N L+MDDT  Q +  L S    +QLNLGYL   
Sbjct: 495 EQPPQWHTDGR--LSGLKSKEFGGNGFNQLVMDDTTSQNRVHLYSSQSNAQLNLGYLVSQ 552

Query: 221 PGNPGRKDQRGEGFDLRTDGQGAIRGAKGLLLTTEGQIAAVGGHLDRQEFIRCMEAALEA 280
             N  R++  G GF L TD  GA+   KGL L++ G+    G  LD  E    M+A+ + 
Sbjct: 553 ADNE-RRNFYGSGFALSTDDYGAVVTQKGLYLSSYGRPGPQGTQLDASEATSLMKASADL 611

Query: 281 AKSLGEYSSQHEALKTDAGPQSTLTKAIEEW-DAGANNHQDKPGRGGQPLLGAYAPAGIG 339
           A+ L + +S+  A   +A  Q +L   ++   D  +   Q    R  +PLL   APAGIG
Sbjct: 612 ARGLSDSASRAGA---EALAQDSLKDFVDATEDKYSGQGQGSANRFKKPLLMMAAPAGIG 668

Query: 340 LATPKSLTSYAGQHIDTVSKLNQQQTAGQQYLVNAGTGISLFAHSGEWKGIAHQGQLVLQ 399
           LAT +    ++ Q     S  +    +G+  L      ISLFA +   K  A +G++ +Q
Sbjct: 669 LATDQGTQVHSAQETTLTSGKDTSIASGKSLLATVKEKISLFAQNAGMKLFAAKGKVEIQ 728

Query: 400 AQQKSITSNAKQDVVVTATDGTIVLNAKTGITLMSGNAGIRIAGGKVEAFGPTLIHLHTG 459
           AQ   +   A++   + +T G + ++AK  + + +G + I+I    +    P        
Sbjct: 729 AQSDDLDLIAEKVARLLSTSGRVEIHAKDEVMISAGGSFIQINSAGITQGTPGKWEAKAS 788

Query: 460 NFDVPPAQGIDGALPQFDSGDTKRSFALVREID--GEPISSTAYTLTTADGSVVGNGVAA 517
              +P     +  +P     + + S    R +   GEP++  AY    +DGSV    + A
Sbjct: 789 LHSMPGPASQNFVMPHVQKSELQPSDMEFRHLTDWGEPLAGAAYKAILSDGSVRKGTLDA 848

Query: 518 DGV-----TPESTLQQIEH 531
            G+      P  T  ++E+
Sbjct: 849 QGIARLSGVPAGTSAKVEY 867