Pairwise Alignments

Query, 542 a.a., type VI secretion system tip protein TssI/VgrG from Ralstonia sp. UNC404CL21Col

Subject, 774 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  274 bits (700), Expect = 1e-77
 Identities = 159/449 (35%), Positives = 244/449 (54%), Gaps = 16/449 (3%)

Query: 74  GIQRAVVTGPENQEVWTNDFGCVKVQFEWDRYGQYDQN--------SSPWIRVANGWSGD 125
           G+  AVV G  ++EV  ++ G + V+F + R  ++ +          S  IR+   W+  
Sbjct: 295 GLMSAVVVGDGDKEVDVDELGRIAVRFLFTRPQEHPRGRGASGTTGDSARIRILQPWADA 354

Query: 126 QFGAMHIPRIGQEVLVDYLNGDPNTPIIIGRVPNQLNLPP-----WQLPGQHALSGIASK 180
            FG    PR+G E+L+ +L   P+ P+ +G + +  + PP      +LP   ALSGI SK
Sbjct: 355 GFGTAFWPRVGSEILIAFLQNHPDKPVALGGLYDGTHYPPKFSRQGKLPENSALSGIRSK 414

Query: 181 ELFGKRRNHLLMDDTQGQIQAQLSSDHQTSQLNLGYLTGVPGNPGRKDQRGEGFDLRTDG 240
           EL   R NHLL DD++GQI AQ+ SDH  +QLN G+L G P   GR   RGEGF+L TD 
Sbjct: 415 ELKANRHNHLLFDDSRGQISAQMFSDHAATQLNQGWL-GSPRTEGRSAPRGEGFELATDA 473

Query: 241 QGAIRGAKGLLLTTEGQIAAVGGHLDRQEFIRCMEAALEAAKSLGEYSSQHEALKTDAGP 300
            G +R A GLL+T   ++ A G  L R+E +  M+  ++    +GEY++QH+A   D  P
Sbjct: 474 AGCLRTAHGLLITAFARLNASGNQLAREETLALMQQCVQLFTGIGEYAAQHQAKAGDHAP 533

Query: 301 QSTLTKAIEEWDAGANNHQDKPGRGGQPLLGAYAPAGIGLATPKSLTSYAGQHIDTVSKL 360
              L + +++W+ G+N   D  G GG P++   APAG+  +TP++  ++AG++ DTV+  
Sbjct: 534 HERLHRQLQQWENGSNTKPDA-GDGGAPVVAVTAPAGLHFSTPETAVTHAGENCDTVALR 592

Query: 361 NQQQTAGQQYLVNAGTGISLFAHSGEWKGIAHQGQLVLQAQQKSITSNAKQDVVVTATDG 420
           + Q  +G+    NAG GISLFA S +   IAHQG+L LQ+Q       A +++ +TA+ G
Sbjct: 593 HIQLASGEHLTANAGKGISLFAQSEDLTLIAHQGELKLQSQHNDTKVAAAKNLSLTASGG 652

Query: 421 TIVLNAKTGITLMSGNAG-IRIAGGKVEAFGPTLIHLHTGNFDVPPAQGIDGALPQFDSG 479
            + + A   I L + +   +R+ GGK++        +H        AQ   G LP F   
Sbjct: 653 KVQIIAADEILLAASDGSYLRLGGGKIDMGCSGAATIHAATHRWIDAQTTPGELPTFAKD 712

Query: 480 DTKRSFALVREIDGEPISSTAYTLTTADG 508
           D  R   L R  D + I+   + + + DG
Sbjct: 713 DVGRKPVLARPTDDQKIAGVRFEIDSGDG 741