Pairwise Alignments

Query, 542 a.a., type VI secretion system tip protein TssI/VgrG from Ralstonia sp. UNC404CL21Col

Subject, 966 a.a., type IV secretion protein Rhs from Herbaspirillum seropedicae SmR1

 Score =  224 bits (572), Expect = 9e-63
 Identities = 153/469 (32%), Positives = 246/469 (52%), Gaps = 44/469 (9%)

Query: 1   MRGVAAGCTYQIANHD----KDDLNREFLVVSTELELED--VAVQSGSIQRYACHVRFE- 53
           +R +A G  + +  H     +    REFLV S + + E+    V   +I+R A    ++ 
Sbjct: 341 VRDLAVGHWFLLDGHPDMRGQKPAQREFLVTSLQQQAENNFPTVLQDAIRRLAPASPWKN 400

Query: 54  -AHPTDEV-FRPPLTTAK---------------PRVKGIQRAVVTGPENQEVWTNDFGCV 96
            AH   ++ +R  LT  +               P V  I  A+V GP  +EV+ ++ G +
Sbjct: 401 LAHSAADLRYRNQLTCRRRTAPLAPHYDPRLHLPPVHPIT-ALVVGPSKEEVYCDELGRI 459

Query: 97  KVQFEWDRYGQY----------DQNSSPWIRVANGWSGDQFGAMHIPRIGQEVLVDYLNG 146
           KVQ +      +           +  S ++RV++ W+G  +G   +PR+G EVL+D+L G
Sbjct: 460 KVQLQGLHPEDHAHAQGAGASGHEQDSAFVRVSSAWAGAGYGHDAVPRVGMEVLIDFLGG 519

Query: 147 DPNTPIIIGRVPNQLNLPP-----WQLPGQHALSGIASKELFGKRRNHLLMDDTQGQIQA 201
           DP+   + G + N +NLP        LPG   LSGI +KE+ G R N L +DD+ GQI  
Sbjct: 520 DPDKMFVAGVLHNGINLPARFSHSGSLPGNRFLSGIKTKEIGGARYNQLRLDDSPGQIST 579

Query: 202 QLSSDHQTSQLNLGYLTGVPGNPGRKDQRGEGFDLRTDGQGAIRGAKGLLLTTEGQIAAV 261
           QL+S+HQ SQLNLGYLT  P + GR + RGEG + RTDG G +R AKG+++T + Q    
Sbjct: 580 QLASEHQHSQLNLGYLTE-PRHGGRGEDRGEGLEARTDGHGVMRAAKGVMITAQSQDRGR 638

Query: 262 GGHLDRQEFIRCMEAALEAAKSLGEYSSQHEALKTDAGPQSTLTKAIEEWDAGANNHQDK 321
           G  L+R   +  ++   E A+ L   +++H A  TD      +   +  WDAG  +  + 
Sbjct: 639 GRMLERAALLETLDNLQELAQRLSHDAARHHAEATDVAQLERIRAQLRAWDAG--DVANG 696

Query: 322 PGRGGQPLLGAYAPAGIGLATPKSLTSYAGQHIDTVSKLNQQQTAGQQYLVNAGTGISLF 381
             R   P++   APAG+ + +  ++   A QHID VS+ N Q +AG++ L+ AG  +S F
Sbjct: 697 AVRAETPMVAVDAPAGVSITSQDTMVLGAAQHIDLVSRANTQLSAGRRLLMRAGEMLSAF 756

Query: 382 AHSGEWKGIAHQGQLVLQAQQKSITSNAKQDVVVTATDGTIVLNAKTGI 430
           A +   K I+ +G + +QA ++ I  +A + +++ A++  I+   K  I
Sbjct: 757 A-AKHMKLISGKGSIKIQAHEEHIDLSAARRILLEASEEIILQAPKISI 804