Pairwise Alignments

Query, 542 a.a., type VI secretion system tip protein TssI/VgrG from Ralstonia sp. UNC404CL21Col

Subject, 913 a.a., type VI secretion protein from Herbaspirillum seropedicae SmR1

 Score =  248 bits (634), Expect = 5e-70
 Identities = 173/500 (34%), Positives = 252/500 (50%), Gaps = 36/500 (7%)

Query: 43  IQRYACHVRFEAHPTDEVFRPPLTTAKPRVKGIQRAVVTGPENQEVWTNDFGCVKVQFEW 102
           + R+ C  R    P    F P +     RV   Q A V GP  +E++ +  G +K++F  
Sbjct: 409 LNRFTCVRR--GTPLVAAFDPRVDLPAVRV---QNAHVVGPAGEELYCDALGRIKLRFHG 463

Query: 103 DRYGQYD----------QNSSPWIRVANGWSGDQFGAMHIPRIGQEVLVDYLNGDPNTPI 152
            R   +           +  S W+RVA+ W+G Q+GA+ +PR+G EVLVD+L GDP+ PI
Sbjct: 464 TRMQDHQHAGGAGASGSERDSAWVRVASHWAGRQWGAISLPRVGDEVLVDFLGGDPDKPI 523

Query: 153 IIGRVPNQLNLPP-----WQLPGQHALSGIASKELFGKRRNHLLMDDTQGQIQAQLSSDH 207
           ++GRV N  +LPP       LPG   L+GI SKE+ G+R N L +DDT  QI AQL+S H
Sbjct: 524 VVGRVYNGQSLPPAFSRVGSLPGNRFLAGIKSKEIQGQRYNQLRLDDTPQQISAQLASQH 583

Query: 208 QTSQLNLGYLTGVPGNPGRKDQRGEGFDLRTDGQGAIRGAKGLLLTTEGQIAAVGGHLDR 267
             S+LNLG+LT  P   GR D RGEG +LRTD   A+RG +G+L++   +  A G  LDR
Sbjct: 584 GQSELNLGWLTH-PRAGGRSDARGEGAELRTDQALALRGGQGVLISAVMRQEASGTQLDR 642

Query: 268 QEFIRCMEAALEAAKSLGEYSSQHEALKTDAGPQSTLTKAIEEWDAGANNHQDKPGRGGQ 327
            E +  +    +  + L   +  H A  T     S L   ++ W+AG+N  Q K   GG+
Sbjct: 643 AEMLGLLHVLQDVQQQLATLAQTHHADDTQLQTFSRLRDQLDAWEAGSNT-QAKSDGGGK 701

Query: 328 PLLGAYAPAGIGLATPKSLTSYAGQHIDTVSKLNQQQTAGQQYLVNAGTGISLFAHSGEW 387
           P++   APAG+ + + + +   A + ID +S  N Q +AG++ L      I LFA     
Sbjct: 702 PMVAVTAPAGVAITSDEGVALGAQKEIDLISVGNTQFSAGKKLLARVAESICLFAQRLGI 761

Query: 388 KGIAHQGQLVLQAQQKSITSNAKQDVVVTATDGTIVLNAKTGITLMSGNAGIRIAGGKVE 447
           + +A  G+L LQ     +   + + +V+TA D  IVL A   + L +  A I + GG + 
Sbjct: 762 QLVAANGKLQLQTHGGDVEVTSARRIVLTAAD-EIVLQAPR-LRLQAQGAQIDLGGGVIT 819

Query: 448 AFGPTLIHLHTGNFDVPPAQGIDGALPQFD----SGDTKRSFALVREIDGEPISSTAYTL 503
                   + +GNF      G D   P  +    +  T   F L R   G P     Y +
Sbjct: 820 QQSSGDHVIRSGNFH--HVSGADSQPPGVELPASTMRTDERFILARRGSGRPHVRQRYRI 877

Query: 504 TTADGSVVGNGVAADGVTPE 523
              DGSV+      +GVT E
Sbjct: 878 ELDDGSVI------EGVTDE 891