Pairwise Alignments

Query, 937 a.a., DNA polymerase I from Ralstonia sp. UNC404CL21Col

Subject, 1015 a.a., DNA polymerase I (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  348 bits (894), Expect = e-100
 Identities = 185/404 (45%), Positives = 260/404 (64%), Gaps = 5/404 (1%)

Query: 538  IEMPTSIVLQKMERNGVLIDAERLAKQSNELGLRLIDLEAEAHKLAGQPFNLGSPKQIGD 597
            +E+P   VL  ME  G+ +D    A   +E+   L  +  E +K AG  FN+ S +Q+G+
Sbjct: 613  LELPLVPVLADMEEAGIAVDRTAFAAFLDEVQHELDRITQEVYKAAGGQFNIRSAQQLGE 672

Query: 598  IFFNQMKLPIIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMV 657
            + F  + LP + KT  G  +T ++ L+KL+  +P+  L+LD+R L KL+STY + LPK+V
Sbjct: 673  LLFGTLGLPTVGKTRGGQATTSQDALEKLSGRHPVVDLILDFRKLEKLRSTYLEPLPKLV 732

Query: 658  NPRTGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPEGSVIVSADYSQ 717
            +   GR+H+T+ Q    TGRL+S++PNLQNIP R + GRR+R  F A EG+++VSADYSQ
Sbjct: 733  DA-AGRIHSTFNQLATATGRLSSSNPNLQNIPARGDLGRRMRSCFTAAEGNLLVSADYSQ 791

Query: 718  IELRIMAHLSQDEGLMRAFREGQDVHRATAAEVFNVTPLEVTPDQRRVAKVINFGLIYGM 777
            IELR++AH+SQD  L+ AFREG D+HR TA  +++  P +VTPDQRR AK INFGLIYGM
Sbjct: 792  IELRVLAHMSQDPTLLAAFREGADIHRRTAGLLYDTAPEDVTPDQRRNAKTINFGLIYGM 851

Query: 778  SAFGLASNLGIGRDAAKLYIDRYFARYPGAASYMDETRQSARERGYVETVFGRRLWLPDI 837
                L   L I  + AK +I+RYF+R     ++ D    +ARE+G+V T+ GRR  LP++
Sbjct: 852  GPQKLGQELRITVNEAKQFIERYFSRLQHLRNFYDNVEAAAREQGHVTTLAGRRRLLPEM 911

Query: 838  NGGNGPRRQAAERAAINAPMQGTAADLIKLSMLAVQGWLEAEAMRSRLVMQVHDELVLEV 897
            +  N   R  A R AIN  +QG+AAD+IKL+MLA         +++RL++QVHDEL+LEV
Sbjct: 912  HSENTQLRSQARRQAINTLIQGSAADIIKLAMLAAHDDPVLHGLKARLILQVHDELMLEV 971

Query: 898  PQDELAVVRERLPELMCSV----ATLRVPLVAEVGVGANWEEAH 937
            P+       ERL  LM  V     TL VPL+ + G G +W  AH
Sbjct: 972  PEANAQAAGERLALLMSEVRPGGVTLDVPLLVDWGAGKDWGSAH 1015



 Score =  158 bits (400), Expect = 1e-42
 Identities = 110/334 (32%), Positives = 171/334 (51%), Gaps = 27/334 (8%)

Query: 4   SQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACIFDA 63
           +QE L L+DGS++++R ++A  +++  +GFPT A++ +  +L +L  +   ++ A + D 
Sbjct: 10  TQEPLWLMDGSAFIFRGFYAFQNMQRSDGFPTNALFIVTRILLRLLREEKPRHFAFVLDG 69

Query: 64  KGKTFRDDLYPAYKEHRAPMPDDLRAQIEPIHEAVRALGWPILVIEGVEADDVIGTLAER 123
           KG TFR DL+P YK  RA  P+ L  Q+EPI   V ALG P+ V +G EADD I +LA R
Sbjct: 70  KGPTFRHDLFPLYKAQRAATPEPLVQQLEPIRRMVTALGLPLEVSDGCEADDCIASLAAR 129

Query: 124 AAREGVRTIVSTG-DKDLAQLVNDHVTLVNTMTNE--TLDPAGVQAKFGVPPERIVDYLS 180
              E  R +V  G DKDL Q ++ +V L +    E      A   A+ G+ P +  D  +
Sbjct: 130 YRDE--RPVVIIGADKDLKQCLHPNVVLWDPGAKEEKLTTLASFTAETGLTPAQWPDVQA 187

Query: 181 LIGDTVDNVPGVPKVGPKTAVKWLTEFGSLDNVIARAGEIKGVVGDNLRNTLEWLPKGRE 240
           +IGDT DN+PG+P VGPKTA K   +F +L+++      +   +       L+ +   R+
Sbjct: 188 VIGDTSDNIPGIPGVGPKTASKIFADFPTLEDIRDGFDRLPPNLQKKFEQHLDAMFLYRQ 247

Query: 241 LLTVKLD--CDLSKEVPTFDALIDGGEDKSKLVDFFSRYGFKTWLREASG--------DA 290
           L T+ +D   DL+ E  +   L     D      F   +  +   RE +G         A
Sbjct: 248 LTTLAIDRCADLTPERLSVQPL-----DARTASTFLQEFELRALSRELAGMVRNGHVQVA 302

Query: 291 LP-------DTRSVGAARRAATPVKNYAGEAAQL 317
           LP       DT ++ A    +TP  + +G    L
Sbjct: 303 LPGDASAPMDTGAMAAPAAPSTPRPSDSGTPGSL 336